Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1632 |
Symbol | |
ID | 5322490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1725869 |
End bp | 1726573 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640790573 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_001327305 |
Protein GI | 150396838 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0209029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.101537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA CCACTCCCGA TGAGCACCCC TCGGCTATTG TTAAAGTCGA TACTTCCAAT TTCTCGGAAG AAGTTCTGAA GCCGGCCGAA CCGGTCATCG CCATCTTCTC GTTCGATGGG TGCGGGCACT GCGCGATAAT TGCACCTTTG CTCGAAGAAA TCGCCACCGA GCTTGCTGGC AAGGTCAAGA TCGTCAAGGT CAGCGACACT GAAAACCCCG AGCTCGCGAA GCAGTATGGC ATATACGGCT TCCCAATGCT TGCCTTGTTC AAGGGTGGTG AAGTCAACGA CATTTTCCTC GGAGCCGCAC CACCTAATAT TGAGACGAAA CTCCGCTCCT GGATTTCCAA GACGGTTCAA ACACCGAAGA TGAACACCAC TCCCGAGTAC CCCACGGCTA TTGTGGAAGG CGATGTTTCC GCTTTCCCGG AAGAAGGTCT GAAGTCGGCC GAAGCAGTCA TCGTCCACTT CTGGGGAAAC CGGTGCCCGC CGTTCGAGCT GATTGAACCC ATCCTCGAAC AAGTCGCCAC CGAGCTTGCT GGCAAGGTCA AGGTCATCAA GCTCAACATC GGGGAAAACC GCGATTTCGC GACGCAGTAT GGCGTAGACG GCTTCCCAAT GCTTGCCATG TTCAAGGGTG GTGAAGTCGC CGGCATCTAC GATGGAGGCT CACTCGGCTC CTGGATTTCG CACGCGATGG CTTGA
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Protein sequence | MNTTTPDEHP SAIVKVDTSN FSEEVLKPAE PVIAIFSFDG CGHCAIIAPL LEEIATELAG KVKIVKVSDT ENPELAKQYG IYGFPMLALF KGGEVNDIFL GAAPPNIETK LRSWISKTVQ TPKMNTTPEY PTAIVEGDVS AFPEEGLKSA EAVIVHFWGN RCPPFELIEP ILEQVATELA GKVKVIKLNI GENRDFATQY GVDGFPMLAM FKGGEVAGIY DGGSLGSWIS HAMA
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