Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1594 |
Symbol | |
ID | 5322452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1691161 |
End bp | 1691985 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790538 |
Product | methyltransferase type 12 |
Protein accession | YP_001327270 |
Protein GI | 150396803 |
COG category | [R] General function prediction only |
COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.501419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGA GCAAGAAGAT TGACGAGGAA GCCCTGGCGG AGGCTTACAA CCGGGCGCTT ACCCTGGAGA AGTCCGGACA GTTCGACGCG GCCGCCGCCG CCTATCGGGA AGTCCTGGAA CTCGATCCGG ACGACCACGG CGGCGCCGCC GTTCGACTGG CGTCGATGGG ACACGGGGAG ACACCGCTGA AGGCTTCGGA CGCCTATGTG GCAACACTGT TCGACCAACA CGCCGATGTT TTCGATAATG TCCTGGTCGA CCAGCTCAAC TATTGCGTAC CGCTCCTCGT CCGCCAGCGC GTTCAGGCCG TCGGGCTCGG TCCCTTCAAA AGGGTACTCG ACCTCGGTTG CGGTACCGGG CTGACCGGCG GGGCCCTGCG CGATCTTGCG GAGGACATTA CCGGCGTGGA CCTGTCGGAG AACATGGTGG AGATCGCCCA TGAGAAGGAT CTCTACGAGA CGCTCTACGT CGCCGAAGCC GTCGATTTTC TCGATGACAA CGACGACGAG CCCTTCGAGT TGATCGTCGC TACCGACGTT CTGCCTTATA TAGGCGCACT GGAGCCGTTG TTCTTCGGTG CCGTCGACAA TCTCGTGCCG GGCGGCCTGC TGATTATCTC CAGCGAGAGT TTGCCCGACG AAGCCATTGG AGAGCACGGC TACGCGGTCG GCCCACACCA GCGCTTCGCT CACTCCGAAG CCTACCTTTG CGCACGTCTT GCGGCGACAG GCTTCGAGAT CATCGACATC AGCGACATCA CCGTGCGCAT GGAAGAAGGC GAGCCGATTG CCGGACAATT GGTGATCGCC CGCTTCAAGC CCTGA
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Protein sequence | MQKSKKIDEE ALAEAYNRAL TLEKSGQFDA AAAAYREVLE LDPDDHGGAA VRLASMGHGE TPLKASDAYV ATLFDQHADV FDNVLVDQLN YCVPLLVRQR VQAVGLGPFK RVLDLGCGTG LTGGALRDLA EDITGVDLSE NMVEIAHEKD LYETLYVAEA VDFLDDNDDE PFELIVATDV LPYIGALEPL FFGAVDNLVP GGLLIISSES LPDEAIGEHG YAVGPHQRFA HSEAYLCARL AATGFEIIDI SDITVRMEEG EPIAGQLVIA RFKP
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