Gene Smed_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1594 
Symbol 
ID5322452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1691161 
End bp1691985 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content61% 
IMG OID640790538 
Productmethyltransferase type 12 
Protein accessionYP_001327270 
Protein GI150396803 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.501419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA GCAAGAAGAT TGACGAGGAA GCCCTGGCGG AGGCTTACAA CCGGGCGCTT 
ACCCTGGAGA AGTCCGGACA GTTCGACGCG GCCGCCGCCG CCTATCGGGA AGTCCTGGAA
CTCGATCCGG ACGACCACGG CGGCGCCGCC GTTCGACTGG CGTCGATGGG ACACGGGGAG
ACACCGCTGA AGGCTTCGGA CGCCTATGTG GCAACACTGT TCGACCAACA CGCCGATGTT
TTCGATAATG TCCTGGTCGA CCAGCTCAAC TATTGCGTAC CGCTCCTCGT CCGCCAGCGC
GTTCAGGCCG TCGGGCTCGG TCCCTTCAAA AGGGTACTCG ACCTCGGTTG CGGTACCGGG
CTGACCGGCG GGGCCCTGCG CGATCTTGCG GAGGACATTA CCGGCGTGGA CCTGTCGGAG
AACATGGTGG AGATCGCCCA TGAGAAGGAT CTCTACGAGA CGCTCTACGT CGCCGAAGCC
GTCGATTTTC TCGATGACAA CGACGACGAG CCCTTCGAGT TGATCGTCGC TACCGACGTT
CTGCCTTATA TAGGCGCACT GGAGCCGTTG TTCTTCGGTG CCGTCGACAA TCTCGTGCCG
GGCGGCCTGC TGATTATCTC CAGCGAGAGT TTGCCCGACG AAGCCATTGG AGAGCACGGC
TACGCGGTCG GCCCACACCA GCGCTTCGCT CACTCCGAAG CCTACCTTTG CGCACGTCTT
GCGGCGACAG GCTTCGAGAT CATCGACATC AGCGACATCA CCGTGCGCAT GGAAGAAGGC
GAGCCGATTG CCGGACAATT GGTGATCGCC CGCTTCAAGC CCTGA
 
Protein sequence
MQKSKKIDEE ALAEAYNRAL TLEKSGQFDA AAAAYREVLE LDPDDHGGAA VRLASMGHGE 
TPLKASDAYV ATLFDQHADV FDNVLVDQLN YCVPLLVRQR VQAVGLGPFK RVLDLGCGTG
LTGGALRDLA EDITGVDLSE NMVEIAHEKD LYETLYVAEA VDFLDDNDDE PFELIVATDV
LPYIGALEPL FFGAVDNLVP GGLLIISSES LPDEAIGEHG YAVGPHQRFA HSEAYLCARL
AATGFEIIDI SDITVRMEEG EPIAGQLVIA RFKP