Gene Smed_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1579 
Symbol 
ID5322437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1677725 
End bp1678246 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID640790523 
ProductMarR family transcriptional regulator 
Protein accessionYP_001327255 
Protein GI150396788 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.359907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA CTGAACATAT TTGTACAACG ATGAACAAAA TGCAAGTGCC CATCGAAAAC 
CACCACTTCC CCTGGGATCA TCCGCGTTTT CGCAGTTGGA TCGCCGTCGC CCGCGCCTGC
CAGCTGATGC AGCAGTCGTT GTCGCGGCGG CTGACGCATC TCGACATCAA GCCGCCTCAC
CTCGATATTC TGGTCAATCT CTATCGGTTC GACGGCATCA CGCAGCAGGA ACTTGCGCGC
AAGCTGCTTG TCGGCCGCTC CAATATGAGC ATGCTGCTGC CGCAGCTCGA AAAGCGTGGC
CTCATCGAGC GACGGGGTGA TGCCAGGGAC AAGCGCGTGC TGCGTCTGTC GCTCACGCCC
ACGGGAAGGA CCTTGACGGA GGAGGCGATG GAGATTCAAA CGGCGCTCAT CGAAAGTTCG
CACGGCGGCA CGCCGATCGA GGACTGCGTC AAGGTCGCAG AGGCGATGGA GCAAATCATC
GCCACCCTGC TCAAAGAGGA CGACTTGCCG GCCGGAGGCT GA
 
Protein sequence
MFNTEHICTT MNKMQVPIEN HHFPWDHPRF RSWIAVARAC QLMQQSLSRR LTHLDIKPPH 
LDILVNLYRF DGITQQELAR KLLVGRSNMS MLLPQLEKRG LIERRGDARD KRVLRLSLTP
TGRTLTEEAM EIQTALIESS HGGTPIEDCV KVAEAMEQII ATLLKEDDLP AGG