Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1579 |
Symbol | |
ID | 5322437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1677725 |
End bp | 1678246 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790523 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001327255 |
Protein GI | 150396788 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.359907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACA CTGAACATAT TTGTACAACG ATGAACAAAA TGCAAGTGCC CATCGAAAAC CACCACTTCC CCTGGGATCA TCCGCGTTTT CGCAGTTGGA TCGCCGTCGC CCGCGCCTGC CAGCTGATGC AGCAGTCGTT GTCGCGGCGG CTGACGCATC TCGACATCAA GCCGCCTCAC CTCGATATTC TGGTCAATCT CTATCGGTTC GACGGCATCA CGCAGCAGGA ACTTGCGCGC AAGCTGCTTG TCGGCCGCTC CAATATGAGC ATGCTGCTGC CGCAGCTCGA AAAGCGTGGC CTCATCGAGC GACGGGGTGA TGCCAGGGAC AAGCGCGTGC TGCGTCTGTC GCTCACGCCC ACGGGAAGGA CCTTGACGGA GGAGGCGATG GAGATTCAAA CGGCGCTCAT CGAAAGTTCG CACGGCGGCA CGCCGATCGA GGACTGCGTC AAGGTCGCAG AGGCGATGGA GCAAATCATC GCCACCCTGC TCAAAGAGGA CGACTTGCCG GCCGGAGGCT GA
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Protein sequence | MFNTEHICTT MNKMQVPIEN HHFPWDHPRF RSWIAVARAC QLMQQSLSRR LTHLDIKPPH LDILVNLYRF DGITQQELAR KLLVGRSNMS MLLPQLEKRG LIERRGDARD KRVLRLSLTP TGRTLTEEAM EIQTALIESS HGGTPIEDCV KVAEAMEQII ATLLKEDDLP AGG
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