Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1572 |
Symbol | |
ID | 5322430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1669977 |
End bp | 1670519 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790516 |
Product | hypothetical protein |
Protein accession | YP_001327248 |
Protein GI | 150396781 |
COG category | [S] Function unknown |
COG ID | [COG3184] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0621324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.847942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAT TCGCAGGTCT TGCCCGCACT TTCGCTTCCG TTGCGATCCT CGTTTCGGTG TCAGTTCCGG CGGTGCAGGC ACAGGACGTG ACGGAGGATC AGATCAAGGC TGCGCGTGCG ACGATCGCGG CGCTCGGTGT GACCAACAGC TTTGACAATA TTCTGCCGAA CCTCGCCGAG CGACTGAAGA ATACCCTGAT TCAGGCGTCG CCGAACCACC AGGAACTGAT CACCGCGACT GTGGACGAGA AGGCGCTCAG CCTCGCCGGA CGACGCTCGG ATCTCGAGCG CGAAGCCGCT GCGATCTACG CGAAGACCTT TACCGTCGAT GAGCTGAAGG CCATCGCCGA CTTCTACAAC TCCACGGCCG GCAAGAAGCT TCTGAACGAT GGTCCGATCG CTTCTCGCGA AATGTTGAAG GCTGCCGACA TCTGGGCGGC CGGCGTTTCG CGCGATCTGA CAAACGAAGC AACAAAATCC CTCGATGAGA AGATCGGCAA TGCGGCGGCG GCAAATGCCG GTACTACGGC GCCTGCGCAG TAA
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Protein sequence | MNKFAGLART FASVAILVSV SVPAVQAQDV TEDQIKAARA TIAALGVTNS FDNILPNLAE RLKNTLIQAS PNHQELITAT VDEKALSLAG RRSDLEREAA AIYAKTFTVD ELKAIADFYN STAGKKLLND GPIASREMLK AADIWAAGVS RDLTNEATKS LDEKIGNAAA ANAGTTAPAQ
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