| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1547 |
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| Symbol | |
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| ID | 5322405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1639842 |
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| End bp | 1641026 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790492 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001327224 |
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| Protein GI | 150396757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.197507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTT TCCGGTCCGT CCTCGTCCTC TCCATCACTC AAATCATCGC CTGGGGAGCG
ATGTTCATGT TCGTCTCGGT GACGGCGGCC GGGATGGCCG ATGATCTTCT ACTGCGACCT
TCGACCATCT ATCTCGGCCC GACGGTCATG CTGGTCGCGA TGGCCCTCTG TTCGCCGGTG
ATGGCGCCGA TCTACGCTCG CTGGGGTGCA AGGCTCGTGC TCGCATTCGG TTCGGCGGCT
GCAGCTCCCG GGCTGTGGTT GCTTGCCGGC GCCGAAGGCC CGGTTTCCTA TTTTTCAGCC
TGGGCCATCC TGGGTCTGGC CGGAGCGGCG GCACTTACGA CTTCGGCTCA GGTGTTTTTG
ACGGAGATAG CGGGGGAGCG TGCCCGCCGG GCAATCGGCG CACAGATGCT CGCCATGGCG
CTTGCACCGA CGATCGCATG GCCAGTCACA ACCATCTGCG AAGCGACTTT CGGCTGGCGC
GGCACATTCG TTCTCTATGG CGCTGTGATG CTGCTCGTCT GCACGCCTTT TCACCTCTTC
GGATTGCCGA GAACCGAGCC GGTAAAGCGC AACTCTTCGG TATCGAATTT CAAGCGCTTT
AGCGCGTCGG AACTGGCGCG CCGCTGGCGC ATCGTTGCCC TGATCACGGC GGCAGTCGCG
CTCAACGGCT TTGTCACCTG GGGCTTCCAG CTCGTCGTGA TAGACCTTTT TCGCAGCTTC
GCCGTGCCTG GTACCCTGGC AGTCGGCTTC GGATCTGCCA TAGGCTTCCT CCAGCTTTCG
GCGCGCCTGT TCGATTTTCT CGGCGGCAAT CGCTGGGACG GATTGACGAC GGGATTGGTA
GCCGCGGCGA TGATGCCGCC GGCATTGCTG GTGCTGGCGC TGGGCGAGGG GGCGGAATGG
TCCATCGTGC TTTTCCTCGT GCTCTACGGC CTTTCAAGCG GAGCAATGTC TGTCAGCCGG
GCGACGATGC CGTTGGTCTT CTTCTCGTCG GCGGAATACG GGACGGTCGT GGCGCGCCTC
GGCCTGCCGC TCAACCTCGC TTTCGCGGCG GCCCCGCCGT TCTTCTCCTT CCTGCTTGGC
GAGGCAGGCA ACAGGTGGGC GCTGACCTTC GCGCTTCTCT GCTCCCTCGG TGCATTGGCC
AGCATGGCTC TGCTCGCGCG CATGAGGCCT GCGAAGTCGG GTTAG
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| Protein sequence | MPVFRSVLVL SITQIIAWGA MFMFVSVTAA GMADDLLLRP STIYLGPTVM LVAMALCSPV
MAPIYARWGA RLVLAFGSAA AAPGLWLLAG AEGPVSYFSA WAILGLAGAA ALTTSAQVFL
TEIAGERARR AIGAQMLAMA LAPTIAWPVT TICEATFGWR GTFVLYGAVM LLVCTPFHLF
GLPRTEPVKR NSSVSNFKRF SASELARRWR IVALITAAVA LNGFVTWGFQ LVVIDLFRSF
AVPGTLAVGF GSAIGFLQLS ARLFDFLGGN RWDGLTTGLV AAAMMPPALL VLALGEGAEW
SIVLFLVLYG LSSGAMSVSR ATMPLVFFSS AEYGTVVARL GLPLNLAFAA APPFFSFLLG
EAGNRWALTF ALLCSLGALA SMALLARMRP AKSG
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