Gene Smed_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1545 
Symbol 
ID5322403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1638701 
End bp1639312 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content60% 
IMG OID640790490 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001327222 
Protein GI150396755 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.689232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.1132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCTC TATTAACGAC AATAAGGAGC CTGTACGGCA TGACTGAGAA GATGACCCTT 
GCCTTGATCT ATGGCAGCGC GCGGCAGGGC CGTTTCTGCG ACACGGTCGC GAGCTGGCTC
ATTCGCGAAC TCGAGGCATC CGACGTGTTC AGCCTGACGA TCATCGATCC CGTCAGAATG
AAAAGCGCTC GTGGCGACAA ACCCGCCCAG CCGGCCGAGT GGATGGAACG CAAGGTCGCA
GAAGCCGATG CCTTCATCGT CATCACTCCC GAATACAACC ACGGCTACCC GGCAGCGCTG
AAGGAGATGA TCGATGCGGT CTATGAGCCC TGGCACGCCA AGCCGGTCGC CTTCGTCTCC
TATGGGGGAT CATCGGGCGG CATACGGGCG GTTGAGCAGT TGCGTCAGGT TTTCGGGGAG
TTGCACGCCG TCACGCTGCG CGACGGCATT TCTTTCGCCA AGGCCTGGTC CAAGTTCGAC
GCCGCCGGGA ATCTCTACAA ACCGGAAGAG ATGCGTGCTC CGCTCTTCCT GATGATCGAC
CGGCTGACCT GGTGGGCGCG TACGCTCAAA CACGCCCGCA AGGCCACACC CTATAACGAG
ATCGCCGCCT GA
 
Protein sequence
MGSLLTTIRS LYGMTEKMTL ALIYGSARQG RFCDTVASWL IRELEASDVF SLTIIDPVRM 
KSARGDKPAQ PAEWMERKVA EADAFIVITP EYNHGYPAAL KEMIDAVYEP WHAKPVAFVS
YGGSSGGIRA VEQLRQVFGE LHAVTLRDGI SFAKAWSKFD AAGNLYKPEE MRAPLFLMID
RLTWWARTLK HARKATPYNE IAA