| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1544 |
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| Symbol | |
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| ID | 5322402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1638184 |
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| End bp | 1638645 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790489 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001327221 |
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| Protein GI | 150396754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.781625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0718657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAAT TGCGCATCGC CCTCTACCAG CCCGACATCC CCGGCAATAC CGGAACGATC
CTGCGGCTCG CCGCCTGCCT TGGCCTTGCG GTCGACATCA TAGAGCCTGC CGGTTTTGAT
CTTTCCGACC GCAATCTCAA GCGCGCCGGG ATGGACTATA TCGCGGCAGT GACCATGACT
CGGCACGTCA ACTGGGAACG ATTCGAAACA TGGCGGTCGA GCACCGGCAG ACGGCTTGTG
CTCGCCTCCA CGAAAGCGGC AGTTCCCTAT ACGCGCTTCA TGTTCAAACC GGACGATATC
CTCCTCCTCG GCAGAGAAAG CGCCGGCGTT CCTGATCAAG TCCATGAGCG GGCAGACGCA
CGCATCCTCA TTCCAATGGC GCCCGGCCAG CGTTCGCTCA ACATCGCCAT GGCCGGCGCC
ATGATCGTGG GCGAAGCGAT ACGGCAGACA GACGCGCTCT GA
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| Protein sequence | MNELRIALYQ PDIPGNTGTI LRLAACLGLA VDIIEPAGFD LSDRNLKRAG MDYIAAVTMT
RHVNWERFET WRSSTGRRLV LASTKAAVPY TRFMFKPDDI LLLGRESAGV PDQVHERADA
RILIPMAPGQ RSLNIAMAGA MIVGEAIRQT DAL
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