| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1518 |
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| Symbol | |
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| ID | 5322376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1599659 |
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| End bp | 1601659 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790465 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327197 |
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| Protein GI | 150396730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCA GGCTTGGCTT GCGGGACTGG CTGCTGGCCA ACGACCCGGC CTTATCCCGG
CTGAGGCAGG CGTCGCGCAT TACCGCGACG GTGGTGTTCT CAACCGCGCT GCTCGTTCTT
TTCCATTTCA TCGTCACATC GCTTCCGCCG GCTGCCTATG GGCTTGCGAT AACGCTGTCG
ATCGAAGGCG GTCTGGCAGT TCGCGACAGG ACCGCATCGG AACAATTGGT CACACGCATT
CTTGCGGTCG TCACCGCGGT CGCAATGGTC ACGCTCGCTT CGGCCCTGGA AGACCACCGG
CACATTTCAG ACTTTGTTTT TCTCGTCATC ATCTTCGTGG CCGTCTATGG CCGCGCCTTC
GGTCAACGCT GGTTCGCCGT CGGCATGTTC GCTTTCATGT CCTATTTCAC AGGAGCCTAT
CTGCGGCCGT CTCTCGACCA GTTGCCGGCG CTCGTTCTCG GCGCCGGAAT TTCGGCTGCC
GTCGCGCATC TGGTGCGGAC GGTCCTGCTC CCGGACGACC GGTACCGTGA CCTCTTGCGG
GCGATCGCGA GCGTCCAGCA GAGGGTGGAT GATATTCTCC TCGGGATCGT GGCCGCCGCG
CGGAAATCGA GGATTGCCGA TCGCCGCAGG CTGCACGCGC TCGAGGAGCG GCTGAAGGAA
TCCGTGCTGA TGGCGGAGAG CTTTATCCCC ATGGACAGCA GCCGCCCGGC ACCGGAGCCT
GGCGCCGCAT CTGCGGACCT CGCCATAGTG CTCTTCGACA TTCACCTCGC CGCGGAGAGC
GTGATCGTAC TCAGCCTTCA GGCCATGCCG CCTGCGGCCC TCGTCGAGGC GGTGATGGCG
CGCGATGCGA AGACCATCGA AGAACGGATG CTGTCCCTTG ACGGAGAGAA CGTCAAACAG
GTCGAGTCGG CCAAAGCTTT GCTCTGGCTT CATTCGGTCC GCGAACGACT GCATTCGAGC
CTGGCCGGCA TCAGGGAGGA GGACCTCGAG GAACTGCCTT CGGCTCAACC ACCAAAGCTG
TCAGCCACTC GCCTTTCCAT CGCGAACCCG GCTTTACGCA ATGCAATCCA GATCACGCTT
GCCTCGGGGA TCGCGATGGT GTTTGGCCTG ATGCTTTCGC GCGAGCGCTG GTTCTGGGCA
GTCCTCGCCG CCTTCCTCGT CTTCACCAAT ACGCGCTCGC GCGGAGACAC CGTAGTCAAG
GCCCTGCAGC GGTCGGCCGG CACGCTTGCG GGCATCATCG TCGGACTTGC TGCGGCAAGC
GCCATCGGCG GGAACATCTA TGTCGTCCTG CCATTGGGTG CCGCCTGCAT TTTCCTGGCA
TTTTATTTTC TCCCGGTTTC CTACGCGACC ATGACCTTCT TCGTCTCGGT CGTACTATCT
CTCGCCTACA GCCTCCTGGG CGTTTTGACG CCGCAACTTC TGGAGTTGCG CCTTGAGGAA
ACGCTGATCG GCTCCGTGGC CGGTGCTGCT GTGGCTTTCG TGGTGTTCCC GACGAGTACC
CGCACGACGC TCGATGCCGC AATCAGGAAT TGGTGCGACA GGCTGGTCGA CCTGCTCGAG
GAGGCAAAGA AGGGAACGAC CGGCCTGAAT TTGGTCAGCC GGTCGCAGGC GCTCGATCGT
GCCTACAGGG ATCTCACCGC GGCCGCCAAG CCGCTCGGCG TTTCCTGGCA GCTCGTCACC
CGACCGGGGC ACGTGCGCCA GACGCTGGCC GTGTTCATGG GATGCACCTA TTGGGCGCGA
ATCGTCGCGC GGAAGATGTC GCAGACAATG AAAGACCCCG CGGCCTTCAC GGCTCGGATA
GAAGAAAATC TAAAGCTCGC CGGCAAGGTG CGCGAAAACG CAGCTGGCTA TTTCTACCAG
TCCCACAGCG TCGCCGGTCC GATAGAACGT CACCTGCCAG TGTCGCGCGA CGATGCCGGC
CTTGGGCTGG AGATGGTCGC CGTTTCGCTC GGGCGCCTCC ATTTTCCGCC GCCGCCCGTC
GGCGAGGAGC GCGGTCTTTA A
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| Protein sequence | MTFRLGLRDW LLANDPALSR LRQASRITAT VVFSTALLVL FHFIVTSLPP AAYGLAITLS
IEGGLAVRDR TASEQLVTRI LAVVTAVAMV TLASALEDHR HISDFVFLVI IFVAVYGRAF
GQRWFAVGMF AFMSYFTGAY LRPSLDQLPA LVLGAGISAA VAHLVRTVLL PDDRYRDLLR
AIASVQQRVD DILLGIVAAA RKSRIADRRR LHALEERLKE SVLMAESFIP MDSSRPAPEP
GAASADLAIV LFDIHLAAES VIVLSLQAMP PAALVEAVMA RDAKTIEERM LSLDGENVKQ
VESAKALLWL HSVRERLHSS LAGIREEDLE ELPSAQPPKL SATRLSIANP ALRNAIQITL
ASGIAMVFGL MLSRERWFWA VLAAFLVFTN TRSRGDTVVK ALQRSAGTLA GIIVGLAAAS
AIGGNIYVVL PLGAACIFLA FYFLPVSYAT MTFFVSVVLS LAYSLLGVLT PQLLELRLEE
TLIGSVAGAA VAFVVFPTST RTTLDAAIRN WCDRLVDLLE EAKKGTTGLN LVSRSQALDR
AYRDLTAAAK PLGVSWQLVT RPGHVRQTLA VFMGCTYWAR IVARKMSQTM KDPAAFTARI
EENLKLAGKV RENAAGYFYQ SHSVAGPIER HLPVSRDDAG LGLEMVAVSL GRLHFPPPPV
GEERGL
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