| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1509 |
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| Symbol | |
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| ID | 5322367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1589918 |
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| End bp | 1591156 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790456 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001327188 |
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| Protein GI | 150396721 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.383449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGC CACTAGATCA AACTGCCACC CTCTCCGGAT TGACCAAGGT TCAGTTCATT
GCTCTCATGG CAATGCTTAT GTCGATCAAC GCGATCTCGA TCGACATCAT GTTGCCGGGG
CTGCAGGAAA TCGGCGCGAG CCTCGGTGTG GCCGATGAGA ACCACCGGCA ATACGTCATA
ACCGCCTACC TGCTCGGCAT GGGATTTGCG CAGCTGTTCT TTGGCCCGCT ATCCGATCGT
TTCGGGCGAA AGGCACCCTT GTTGGGAGGC CTGGCGCTTT ACGGCGTCTG CGCACTCGCG
ATCGTCTTCG TCCCGACATT CACGACGCTC CTGTTCCTTC GGCTCGTACA GGGCGTAGGC
GCGGCGGCAA CCCGCGTCAT CACTGTCTCA ATAGTGCGCG ATGTCTATGG CGGGCGGCAA
ATGGCAGAGA TCATGTCGCT GGTCATGATG GTGTTCATGA TCGTCCCGGT CATTGCACCG
AGTATCGGGC AATTGATCAT GCTGTTTTCC GAATGGCACA TGATCTTCGT CGTAATCGGA
TTGTTTGCGG TCGCCGTCGC GCTTCCCGTA TCGCTGCGGC TTCGTGAAAC CCTGGCCCCC
GAGAACCGGC GCGCCTTCAC GGCGTCATCC GTGATCGCCG GCTTCCGCAT CGTCCTGACG
AACCGGCTGG CGCTCTTCTA CACCCTGGCA ACCTCGGCGC TTCTCGGCGG CCTGTTCGGC
TTTATCAACT CTGCGCAGCA GATTCTCGTC GGAGTCTATG GTCTCGGCGT CTGGTTTCCG
GCTGTTTTCG CCGCTTTCGC CGGCATGATG GCGGTCGCCT CCTTCACCAA TTCGCGCCTC
GTGCGGACGT TCGGCATGCG GGCATTGTCG CATGCCGCAC TTCTCGGCTT CACGCTGGCG
AGTTTCATCT GGATGTCGGC TTCCCTGATC GGGCCGCTGC CTCTGCCGCT CTTCATGCTT
CTCCATGCCG CCACCATGTT TCAGTTCGGG CTGATAGCCG CAAACTTCAA CGCCATGGCG
ATGGAGCCGC TCGGTCACGT GGCTGGCACC GCCTCCTCTG TTCTTGGTTT CACGCAGACG
ATCGGCGGCG GCATCATCGG TGCGTTCATC GGCCAAGCCT TCGACAATAG CGTCACGCCC
CTTGCGATCG GCTTCTTTAC AGTGGCCGTC GTCGCCCTGG CCTGTGTGCT GATCGCAGAG
GGCGGAAAGC TATTCAAACC GCACAATCCG GCGGGTTAG
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| Protein sequence | MTRPLDQTAT LSGLTKVQFI ALMAMLMSIN AISIDIMLPG LQEIGASLGV ADENHRQYVI
TAYLLGMGFA QLFFGPLSDR FGRKAPLLGG LALYGVCALA IVFVPTFTTL LFLRLVQGVG
AAATRVITVS IVRDVYGGRQ MAEIMSLVMM VFMIVPVIAP SIGQLIMLFS EWHMIFVVIG
LFAVAVALPV SLRLRETLAP ENRRAFTASS VIAGFRIVLT NRLALFYTLA TSALLGGLFG
FINSAQQILV GVYGLGVWFP AVFAAFAGMM AVASFTNSRL VRTFGMRALS HAALLGFTLA
SFIWMSASLI GPLPLPLFML LHAATMFQFG LIAANFNAMA MEPLGHVAGT ASSVLGFTQT
IGGGIIGAFI GQAFDNSVTP LAIGFFTVAV VALACVLIAE GGKLFKPHNP AG
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