| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1488 |
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| Symbol | |
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| ID | 5322346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1573881 |
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| End bp | 1574888 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640790436 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_001327168 |
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| Protein GI | 150396701 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0291995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGA AGGGCGCCAG AAATCTGATC ACGGACGTTC CGGGCTTGCT GGTGGGCAAT
GCTGAAGACC ATCACCTGAA ATCCGGTGTC ACGACGGTGC TCTGCGATCC ACCGGCGACG
GCGGCGGTTC AGGTATTGGG TGGCGCCCCC GGCACGCGCG AAACCGACCT GCTCGCTCCG
CACAACATGG TGCAGGCGGT CGACGCCATC GTGCTTTCCG GTGGCTCGGC CTTCGGCCTT
GACGCAGCCT CCGGCGTGCA GGCGGCACTG CGCGAGATGG GGCGCGGTTT CGCCGTCGGG
CCACACCGCG TACCGATCGT GCCTGCGGCG ATCCTCTTCG ATCTTGCAAA TGGCGGCGGC
AAGGATTGGG CGCGCTACGC TCCCTACCGC GAGCTCGGCT ACGAAGCGGC ATATGCCGTA
TCCGCGGATT TCGTCACAGG CAGTTCCGGC GCAGGTACGG GCGCGCTCAC GGCCACCTTC
AAGGGAGGCC TCGGCTCAGC CTCGACGGTG CTGGCCAACG GAATCACGGT CGGTGCGCTG
GTGGCGGTGA ATGCCTTCGG TTCCGCGACC GTTGGCGAGA CACGCCATTT CTGGGCCGCG
CCCTTCGAGA TGGAAAGAGA GTTCGGCGGG CTTGGCCAGC CATCGCCCTG GCCGGCGGAC
GCCGCTACCC CCCGGTTCAA GTTTCGGGAG CGGCAAGTCT CCCCGGCAAA CACGACCATC
GCCGTCATCG CCACCGATGC GTTGCTCAGC AAAGCGGAGG CGAAGCGGCT GGCAATCGCA
GCCCATGACG GCTTTTCGCG CGCGCTCTGG CCCTCTCATA CGCCGCTCGA CGGCGATCTC
GTCTTCGCGC TTTCGACCGG CACGAGTGGA AAAGCTCCGT CGCTTCAGGA TTCCATCGAT
CTCAGCGCCG CAGCCGCCGC CACTATGGCC CGCGCGATCG CGCGCGGCGT TTATGACGCA
TGCGATACAG GCAACGATCT GATACCAGCC TGGTCGGCCC GCTTCTGA
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| Protein sequence | MMQKGARNLI TDVPGLLVGN AEDHHLKSGV TTVLCDPPAT AAVQVLGGAP GTRETDLLAP
HNMVQAVDAI VLSGGSAFGL DAASGVQAAL REMGRGFAVG PHRVPIVPAA ILFDLANGGG
KDWARYAPYR ELGYEAAYAV SADFVTGSSG AGTGALTATF KGGLGSASTV LANGITVGAL
VAVNAFGSAT VGETRHFWAA PFEMEREFGG LGQPSPWPAD AATPRFKFRE RQVSPANTTI
AVIATDALLS KAEAKRLAIA AHDGFSRALW PSHTPLDGDL VFALSTGTSG KAPSLQDSID
LSAAAAATMA RAIARGVYDA CDTGNDLIPA WSARF
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