Gene Smed_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1485 
Symbol 
ID5322343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1571152 
End bp1572081 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content60% 
IMG OID640790433 
ProductATPase 
Protein accessionYP_001327165 
Protein GI150396698 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.809119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0145294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAC AGGTTAGAGG AAAGTTGCCC CAGTCCATTG ACGAGACGAG GGCACTGCTG 
GAAGCACAGG ACTATCTCGC CGGAACCGCG CTCGCGACCG TTCTCTTTCT CGCACTCAGG
ATGAAGCGCC CGCTTTTCCT CGAAGGTGAG GCCGGCGTCG GCAAGACCGA AATCGCCAAG
GTTCTGGCGC GCGCCCTCGA CCGTCCCCTT ATCCGGCTCC AGTGCTACGA GGGACTGGAT
GTCGCCTCGG CCGTGTACGA ATGGAACTAT CCTGCTCAAA TGTTGGAAAT TCGCCTCTCG
GAAGCGGCCG GAATGGTCGA CCGGCAAAGG GTGGAAAGCG ACATCTTTTC CGAACGCTTC
CTCATAAGGC GGCCGGTGTT GCAGGCGATA TCGACAACCG CCGGTGGCGC GCCGGTTTTT
CTGATCGATG AGCTCGATCG CACCGACGAA GCCTTCGAAG CCTTTCTCCT GGAGGTGCTT
TCCGACTTCC AGGTCACAAT CCCCGAAATC GGGACGATCA AAGCGGACGA GCCGCCGATC
GTCATCATCA CCACCAACAG AACGCGCGAA ATTCACGATG CCTTGAAGCG GCGCTGCCTC
TATCATTGGG TCGATTACCC GAATGCGGCG CAGGAACTGG AGATCATCCG CCGCAAGGTG
CCGGGCTGCA GCGCGGCGCT GTCTCGCGAG ATCGTCGCTT ATGTTCAGAG ATTGAGAACG
CTCGACCTCT TCAAGAACCC GGGTGTGGCG GAAACGATCG ACTGGGCGAC CGCATTGACG
GAACTAGACG CTCTTGCACT CGATCCCGAG AAGGTGGCCG ACACGCTCGG CACCCTGCTC
AAATACCAGG ATGATATTGC CCGGATCGAA GGCACTGAAG GCAGCCGCCT GCTCGGCGAA
GTGAAAGCCG AATTGCTGGC GCAGGGCTGA
 
Protein sequence
MARQVRGKLP QSIDETRALL EAQDYLAGTA LATVLFLALR MKRPLFLEGE AGVGKTEIAK 
VLARALDRPL IRLQCYEGLD VASAVYEWNY PAQMLEIRLS EAAGMVDRQR VESDIFSERF
LIRRPVLQAI STTAGGAPVF LIDELDRTDE AFEAFLLEVL SDFQVTIPEI GTIKADEPPI
VIITTNRTRE IHDALKRRCL YHWVDYPNAA QELEIIRRKV PGCSAALSRE IVAYVQRLRT
LDLFKNPGVA ETIDWATALT ELDALALDPE KVADTLGTLL KYQDDIARIE GTEGSRLLGE
VKAELLAQG