| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1441 |
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| Symbol | |
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| ID | 5322293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1521822 |
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| End bp | 1522625 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790384 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327122 |
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| Protein GI | 150396655 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0435882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000139106 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGACC GTCTTAGAGG AAAATCGGCA ATCGTCTTCG GTGCAGGTTC CTCCGGCCCC
GGCTGGGGGA ACGGCAAGGC GGCCGCCGTG CTTTATGCGC GCGAGGGCGC CAAGGTCGCA
TGCGTCGACC TCGACATCGA GGCCGCCGGG GAAACGGCGG CGATCATTGC GGAAGAAGGC
GGCGAGGCGA TCGCCATTGC CGCGGACGTT ACCGCCCTCG CATCGATCGA AGCCGCCGTT
GCTGCCGCGC GGCAGGCATA CGGCACCCTT TCGATCCTGC ATAACAATGT GGGCGTAACG
CATATGGGTG GGCCGGTGGA GCTGTCGGAA GCGCAGTTCC AGCAATCCGT CGATCTCAAC
CTCGGCTCGG TGTTCCGCAC TGCCAAGGCA GTGATCCCGC ATATGATCGA GGCCGGCGGC
GGTGCAATCG TCAACATCTC GTCGCTTGCC GCTATCCGGT GGACCGGTTA CCCCTATTTT
GCCTATTACG CGACGAAGGC GGCAGTCAAC CAGGCGACTG TCGCGATCGC GGTTCAATAT
GCGCGGCAGG GAATCCGGGC CAACTGTGTC GTCCCCGGCC TGATCGACAC GCCGCTGATC
TACAAGCAGA TCTCCTCGCA TTATGCTTCC ACGGATGAAA TGGTTGCTGC CCGCAACGCG
GCGCTCCCAA GCGGGCATAT GGGCGATGCC TGGGACGTCG CCAATGCCGC GCTTTTCCTT
GCCTCCGACG AAGCGAAATT CATCAACGGC GTTTGTCTGC CGGTCGATGG CGGTCAGAGC
TGCACGATCA TGGGAGCGCG CTGA
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| Protein sequence | MADRLRGKSA IVFGAGSSGP GWGNGKAAAV LYAREGAKVA CVDLDIEAAG ETAAIIAEEG
GEAIAIAADV TALASIEAAV AAARQAYGTL SILHNNVGVT HMGGPVELSE AQFQQSVDLN
LGSVFRTAKA VIPHMIEAGG GAIVNISSLA AIRWTGYPYF AYYATKAAVN QATVAIAVQY
ARQGIRANCV VPGLIDTPLI YKQISSHYAS TDEMVAARNA ALPSGHMGDA WDVANAALFL
ASDEAKFING VCLPVDGGQS CTIMGAR
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