| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1434 |
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| Symbol | |
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| ID | 5322286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1515373 |
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| End bp | 1516020 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790377 |
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| Product | porin |
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| Protein accession | YP_001327115 |
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| Protein GI | 150396648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000170273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGAA ATGTGCTTGT TGCGATCTTC GCGGCCTTCA TGCTTGGCGG AAAGGCGCAT
GCAGCCGATC TGGCACAGCC ACCGGAGCCG ACACCGACGG TCGAGACAGT CCACAGCTTC
GTCTGGACTG GCGGCTATCT CGGCTTGCAG GGCGGCGGTG GCTGGCTGAA CAGCGATCTG
AGCGTTCCCG GCGGCGGCGG CTCGAAGCGG TTCAGTGGAG GCCTCTTGGG CGCCTTCGCC
GGCTACAATT ACCAGCATGG TGACTGGGTC GTCGGCGTGG AGGGCGATGT CAGCTACAAC
TGGAATGATG AGACCGTCAC CGTCTTCGGC ACGAACACCG ATGTGGGAAC GGATGTTTCC
GGATCCGTGC GCGCCCGCCT CGGATACACC GTCAACGACA GGACGCTCCT CTATGCCACA
GGCGGCTGGG CGGTAACGCG CGGTTTCGTC GACGTTGCCG GCGCGCCGAA GGAGAAGGAA
ACCTTCAACG GCTGGACCAT CGGTGGCGGC GTCGACTACG GGTTCACGGA CAGCGTCTTC
GGACGCGCGG AGTATCGCTA CAACGATTTC AGCGACAAGG ATGTCGGCGG CGTCGATGTC
GACCTCGACC AGCACCAGTT CACCATTGGT GTCGGCGTAA AGTTCTGA
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| Protein sequence | MIRNVLVAIF AAFMLGGKAH AADLAQPPEP TPTVETVHSF VWTGGYLGLQ GGGGWLNSDL
SVPGGGGSKR FSGGLLGAFA GYNYQHGDWV VGVEGDVSYN WNDETVTVFG TNTDVGTDVS
GSVRARLGYT VNDRTLLYAT GGWAVTRGFV DVAGAPKEKE TFNGWTIGGG VDYGFTDSVF
GRAEYRYNDF SDKDVGGVDV DLDQHQFTIG VGVKF
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