| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1433 |
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| Symbol | |
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| ID | 5322285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1514091 |
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| End bp | 1515116 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790376 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001327114 |
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| Protein GI | 150396647 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000646594 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATGG TTGCGAACAG GATTGCACAA TCTACGATCG AGGTCGCGGT GATTATCCTG
CCCGAGTCGT CGATCATGTC CCTTGCTTCC GTCCTCGATC CGATGCGCGC GGCAAACCGG
GTGACCGGGC ACGAGGTCTT CCGGTGGCGG TTGCTCTCGG CCGATGGTGA CGCGGTGATG
CTCACCTGCG GCTTATCTAT TCCGGTGGAT GCTCGGTTCG CCCTGCCGAT CGTCGGGGAT
CTCCTTCTCA TCATCGGCGG GTTCAATCTC GAGAGATATG CAGGCAAGCG CTTCCTCGCT
ACTCTGCAGG AATGCGCGCG GCATTTCGAT ATCGTCGCGG GCGTTGAGTC CGGGTGTTGG
CTGCTCGGGC GTTCCGGGCT TATCAAAGGC CGCAAGGCAA CCGCCCACTG GGAGGAGCTC
GAGGATTTCA GTCGGGCATT TCCCGAGCTG CAGGTGATTG GGGACCGTTT CGTGACCGAC
GGCAAGTACT GGACCTCCGG TGGCGCGTCG CCGACTTTCG ACATGATGCT GCACCTCATT
GCGGAGAGGC TGGGGCCGGC TATCGCGCTG GATGTAGCGA GCATTTTTGT CTACGATCAG
ATGCACAGTC CCACGGACGT ACAGCCCTTC GTCTCGCTCG GCCGCATGGA AGCACGAGAT
CCGGAGCTCG CCGCGGCCAT AAGGCTGATG GAGCGCACAC TCGAACGGCC GATGACGGTC
GCGGCGCTTG CGCGCCGGCT ATCCGTCTCA CAACGCAAGC TTGAAATGCT CTTCGCCAAA
GGCCTCTCGA CCAGCCCGGG CGCCTATTAC CTGCGCCTCA GGCTGCAGGT CTCCCACCGG
CTCGTTCGCG ATACCGGAAT TCCAATGCGG GATGTCGCCC TTCGCTGCGG GTTTGACAGT
CTCTCGGCCT TTTCGCGTGC CTACCGACGC GAATACGGGA CGAGCCCTAC GGGTATGCGC
AGCGCACGCA GCGCAAGCGT CGCTTCTGAG ATGTCAGATG AAGGCGGACG CCACGCGCGC
CCCTGA
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| Protein sequence | MRMVANRIAQ STIEVAVIIL PESSIMSLAS VLDPMRAANR VTGHEVFRWR LLSADGDAVM
LTCGLSIPVD ARFALPIVGD LLLIIGGFNL ERYAGKRFLA TLQECARHFD IVAGVESGCW
LLGRSGLIKG RKATAHWEEL EDFSRAFPEL QVIGDRFVTD GKYWTSGGAS PTFDMMLHLI
AERLGPAIAL DVASIFVYDQ MHSPTDVQPF VSLGRMEARD PELAAAIRLM ERTLERPMTV
AALARRLSVS QRKLEMLFAK GLSTSPGAYY LRLRLQVSHR LVRDTGIPMR DVALRCGFDS
LSAFSRAYRR EYGTSPTGMR SARSASVASE MSDEGGRHAR P
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