| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1424 |
|---|
| Symbol | |
|---|
| ID | 5322276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1506918 |
|---|
| End bp | 1507964 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640790367 |
|---|
| Product | FkbM family methyltransferase |
|---|
| Protein accession | YP_001327105 |
|---|
| Protein GI | 150396638 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00312344 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG CGCCGAGGCA GGTTGTGTCA TGGCTGGGAT ATATGACTAC GCGCATTATC
AGGTCGCTTC GGAAGAGGTT CCGGCGTGCA TTTAAGCCGC GGACGGTTTC TATATTCGGG
GTCAAACTTA TCGCGGCAGA CGAACGTGTT CCCCCGTATC TGCAAGACCT GATGTATCGC
GAGGTCTACG AAGACACAGA GCGAAACATC CTTCTAAAGA TACTGAAGCC AAGCGCAAGG
GTTCTGGAAA TAGGGACCGG CGTCGGCTTT ATTGCCGCTC TCGCTGCCGC AATTTGCGGT
CAGGATAACG TCTCGACATA TGAGGCAAAC AGCAGCCTTG CCAGCCTCAT ACGCGACAAC
TTCCGCCTGA ATCAACTAGA GCCACATCTC GTCCTAAAGG CCGTTACTTC AGACGGCCGG
ACGGTTTCGT TCCATCAGGC CGAAAATGTC ATCTCCTCAA GCATTTTCGA CCGGAAGATT
GTTGGACACA CGATTGAAGT GGAGAGCGTG AAGTTTTCCC ATATCCTCGA TCGTCATCGG
CCTGACGTTC TGATCATGGA TGTCGAGGGT GCCGAGGACG AGCTCCTCCG CATCCCCGGC
TTTGGCAGCG TCCAACATAT TCCCGTAGAA CTCCAGCCGC ACATCATCGG CCGGGATAAG
GTGGATGAGC TGAAGCGCAT AGTTGAACTC CGCGGCTTCC GGCAGCGGTT CAGCGACCAT
CTCTCAGCTA GGCGCATCAG AACTATCAAT GCCTTGCGTG CTGCCCCTCC TCTTGCCATG
GATGCCGGAT TGAAGATACT GGCGCCAGAC GCAGTTTTCG CCACGATGGC GCAAGCGTGC
CAAGGGGTCC GCGATCAGCT GAGACGTCAT GAGAATCTTC ATCCTCGCTG GAATTCTGAT
CGGAGCCTTG CTCGTGTTCT TGCTCGTATC GGGCATTGCA GACATCCCAT GCCAGGCAGG
CAGCTGGGAT CCCGGCAAGT ACACCTGCAC TCATACGGGA GTCACGTCGT GACAACGAGA
GCGCTCGCCC GTTTCACCCG TGCATGA
|
|---|
| Protein sequence | MARAPRQVVS WLGYMTTRII RSLRKRFRRA FKPRTVSIFG VKLIAADERV PPYLQDLMYR
EVYEDTERNI LLKILKPSAR VLEIGTGVGF IAALAAAICG QDNVSTYEAN SSLASLIRDN
FRLNQLEPHL VLKAVTSDGR TVSFHQAENV ISSSIFDRKI VGHTIEVESV KFSHILDRHR
PDVLIMDVEG AEDELLRIPG FGSVQHIPVE LQPHIIGRDK VDELKRIVEL RGFRQRFSDH
LSARRIRTIN ALRAAPPLAM DAGLKILAPD AVFATMAQAC QGVRDQLRRH ENLHPRWNSD
RSLARVLARI GHCRHPMPGR QLGSRQVHLH SYGSHVVTTR ALARFTRA
|
|---|
| |