Gene Smed_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1402 
Symbol 
ID5322253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1481214 
End bp1481906 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content58% 
IMG OID640790344 
Producthypothetical protein 
Protein accessionYP_001327083 
Protein GI150396616 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.183629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA GTTCCAAAAG CGGCATCATC GCGGCACGAC TGCGCAATTA CTTCTTCACG 
GGCCTCATAA TCTGCGCGCC TCTGGCGATC ACGGTATGGC TCGTCCGATC GTTCATCGAG
TGGGCCGACG GCTGGGTGAA GCCGTATTTG CCGAAGTTTT ATAACCCGGA CAACTATCTG
CCGATCGCGA TCCCTGGATT CGGGCTGCTC GTTGCGGTGA TCGTCATCAC TCTGGTCGGC
TTTCTGACCG CCAACCTTGT GGGCCGTTCG ATCATCAATT TCGGCGAGTC GCTTCTTAAT
AGAACGCCGC TCGTCCGCTC CATCTACAAG TCGCTGAAGC AGATCTTCCA GACCGTGCTG
CAGGACCAAT CGTCGTCCTT CAAGAAGGCA GGGTTGATAG AATATCCCAG CCCCGGACTC
TGGTCGCTCG TTTTCATCGC CACGGACGTC AAGGGCGAGA TCGCAGCAAG ATTCGACGAG
CGCGGCATGG ACATGGTGAC GGTCTTCCTG CCTCCGACAC CGATCCCCAC TGCCGGCTTC
CTGCTCTTCG TGCCGCGCGA CAAGATCATT CCCTTGCAGA TGAGCGCAGA AGATGCAGCA
AAGCTGCTGA TTTCCGGAGG CCTCGTCGCC CCCGATTACA GCCCTCTGGC CAACGCGCCG
CAGCTTGCGA TCAAACAGCA GGAGAGCGTT TGA
 
Protein sequence
MTDSSKSGII AARLRNYFFT GLIICAPLAI TVWLVRSFIE WADGWVKPYL PKFYNPDNYL 
PIAIPGFGLL VAVIVITLVG FLTANLVGRS IINFGESLLN RTPLVRSIYK SLKQIFQTVL
QDQSSSFKKA GLIEYPSPGL WSLVFIATDV KGEIAARFDE RGMDMVTVFL PPTPIPTAGF
LLFVPRDKII PLQMSAEDAA KLLISGGLVA PDYSPLANAP QLAIKQQESV