Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1402 |
Symbol | |
ID | 5322253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1481214 |
End bp | 1481906 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640790344 |
Product | hypothetical protein |
Protein accession | YP_001327083 |
Protein GI | 150396616 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.183629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA GTTCCAAAAG CGGCATCATC GCGGCACGAC TGCGCAATTA CTTCTTCACG GGCCTCATAA TCTGCGCGCC TCTGGCGATC ACGGTATGGC TCGTCCGATC GTTCATCGAG TGGGCCGACG GCTGGGTGAA GCCGTATTTG CCGAAGTTTT ATAACCCGGA CAACTATCTG CCGATCGCGA TCCCTGGATT CGGGCTGCTC GTTGCGGTGA TCGTCATCAC TCTGGTCGGC TTTCTGACCG CCAACCTTGT GGGCCGTTCG ATCATCAATT TCGGCGAGTC GCTTCTTAAT AGAACGCCGC TCGTCCGCTC CATCTACAAG TCGCTGAAGC AGATCTTCCA GACCGTGCTG CAGGACCAAT CGTCGTCCTT CAAGAAGGCA GGGTTGATAG AATATCCCAG CCCCGGACTC TGGTCGCTCG TTTTCATCGC CACGGACGTC AAGGGCGAGA TCGCAGCAAG ATTCGACGAG CGCGGCATGG ACATGGTGAC GGTCTTCCTG CCTCCGACAC CGATCCCCAC TGCCGGCTTC CTGCTCTTCG TGCCGCGCGA CAAGATCATT CCCTTGCAGA TGAGCGCAGA AGATGCAGCA AAGCTGCTGA TTTCCGGAGG CCTCGTCGCC CCCGATTACA GCCCTCTGGC CAACGCGCCG CAGCTTGCGA TCAAACAGCA GGAGAGCGTT TGA
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Protein sequence | MTDSSKSGII AARLRNYFFT GLIICAPLAI TVWLVRSFIE WADGWVKPYL PKFYNPDNYL PIAIPGFGLL VAVIVITLVG FLTANLVGRS IINFGESLLN RTPLVRSIYK SLKQIFQTVL QDQSSSFKKA GLIEYPSPGL WSLVFIATDV KGEIAARFDE RGMDMVTVFL PPTPIPTAGF LLFVPRDKII PLQMSAEDAA KLLISGGLVA PDYSPLANAP QLAIKQQESV
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