Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1369 |
Symbol | |
ID | 5322220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1449480 |
End bp | 1449941 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640790312 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001327052 |
Protein GI | 150396585 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.362978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCT TGGATGCTAT CGATCGTTCG ATTCTGCGCA TTCTGCAGCA GGATGGCCGC ATCTCGAATG CCGACCTTGC CTCGAGGGTC GGCCTTTCTC CGTCCGCCTG TTCGCGGCGG GTCGACATAC TCGAAAAGTC CGGGACCATT GCCGGCTACC ATGCGCGCAT CGCCCACAAG GCGCTCGATT ACAAGATCAT GGTCATCGTG CACATCTCGC TATCGGGGCA GTTTGCCAAG ACGCTAACCG AATTCGAAGC CGCCGTGAAA CTGTGCCCGA ACGTGCTCGT ATGTTATCTG ATGTCCGGAG AATATGATTA TATTCTGCGT GTGGCGGCGA AGGACCTGGA GGACTACGAA CGCATTCACC GCGACTGGCT CTCGGCGCTG CCGCATGTGG TGAAGATCAA CTCGAGTTTT TCGCTCCGCG AAATCATCGA TAGGCCGAAT GTCGGCATCT GA
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Protein sequence | MSGLDAIDRS ILRILQQDGR ISNADLASRV GLSPSACSRR VDILEKSGTI AGYHARIAHK ALDYKIMVIV HISLSGQFAK TLTEFEAAVK LCPNVLVCYL MSGEYDYILR VAAKDLEDYE RIHRDWLSAL PHVVKINSSF SLREIIDRPN VGI
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