Gene Smed_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1364 
Symbol 
ID5322215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1445358 
End bp1446107 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content59% 
IMG OID640790307 
Productthreonyl/alanyl tRNA synthetase SAD 
Protein accessionYP_001327047 
Protein GI150396580 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.277683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAT CTGTCACCGC CCTCTTCCGA GAAGATTTCT ATCTTTCGAC CTGCGAAGCA 
AGCGTGACGG CAATCCTGGA AGACGGCGGC ATCGAGCTCG ATCAGACCTG CTTCTATGCG
ACCTCCGGCG GGCAACCGGG TGACAAGGGC TTTCTCGAGC GCGAAGACGG GAGCCGCATA
GACATCATCG ATACGCGGCA TGGTGCGACC AAGGACATCA TCTTGCACAT TCCCGCAGAA
GGAGCGCGCA TGCCTGATGT CGGCGAAAAG CTGGTGCTGC ACATAGACTG GCCGCGCCGC
TACCGGCTGA TGCGCATGCA TACGGCTTGC CATCTTCTTT CAGTCGTCTG CCCTTTCCCG
ATCACCGGCG CAGCAGTCGG AGAAGAAGAA AGCCGGGTCG ACTTCGACAT GAGCGAATTG
ATCGACAAGG ACCAGGTCAC GGCAGCGCTG ATGAAGCTCG TCCATGAGAA CCATCCGGTC
TATGTGCAGT GGATCACCGA CGAGGAGCTG GCCGCCAATC CGGCCATAGT CAAGTCTAAG
AATGTCCGCC CGCCAATGGG GCTTGGCCGC GTCAGTCTCG TCTGCATCGG CGAGAATTCA
TCGGTAGACA GCCAGCCGTG CGGCGGAACG CATGTTTCGG AGACACAGGA AGTGGGCGCG
ATCCACATCG CGAAAATCGA AAAGAAAGGT AAAGAAAACC GGCGTTTCCG AATACGATTC
GCGGCGCCCG AGGATCGGGC CTTCGCCTGA
 
Protein sequence
MTRSVTALFR EDFYLSTCEA SVTAILEDGG IELDQTCFYA TSGGQPGDKG FLEREDGSRI 
DIIDTRHGAT KDIILHIPAE GARMPDVGEK LVLHIDWPRR YRLMRMHTAC HLLSVVCPFP
ITGAAVGEEE SRVDFDMSEL IDKDQVTAAL MKLVHENHPV YVQWITDEEL AANPAIVKSK
NVRPPMGLGR VSLVCIGENS SVDSQPCGGT HVSETQEVGA IHIAKIEKKG KENRRFRIRF
AAPEDRAFA