Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1364 |
Symbol | |
ID | 5322215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1445358 |
End bp | 1446107 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790307 |
Product | threonyl/alanyl tRNA synthetase SAD |
Protein accession | YP_001327047 |
Protein GI | 150396580 |
COG category | [R] General function prediction only |
COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.277683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGAT CTGTCACCGC CCTCTTCCGA GAAGATTTCT ATCTTTCGAC CTGCGAAGCA AGCGTGACGG CAATCCTGGA AGACGGCGGC ATCGAGCTCG ATCAGACCTG CTTCTATGCG ACCTCCGGCG GGCAACCGGG TGACAAGGGC TTTCTCGAGC GCGAAGACGG GAGCCGCATA GACATCATCG ATACGCGGCA TGGTGCGACC AAGGACATCA TCTTGCACAT TCCCGCAGAA GGAGCGCGCA TGCCTGATGT CGGCGAAAAG CTGGTGCTGC ACATAGACTG GCCGCGCCGC TACCGGCTGA TGCGCATGCA TACGGCTTGC CATCTTCTTT CAGTCGTCTG CCCTTTCCCG ATCACCGGCG CAGCAGTCGG AGAAGAAGAA AGCCGGGTCG ACTTCGACAT GAGCGAATTG ATCGACAAGG ACCAGGTCAC GGCAGCGCTG ATGAAGCTCG TCCATGAGAA CCATCCGGTC TATGTGCAGT GGATCACCGA CGAGGAGCTG GCCGCCAATC CGGCCATAGT CAAGTCTAAG AATGTCCGCC CGCCAATGGG GCTTGGCCGC GTCAGTCTCG TCTGCATCGG CGAGAATTCA TCGGTAGACA GCCAGCCGTG CGGCGGAACG CATGTTTCGG AGACACAGGA AGTGGGCGCG ATCCACATCG CGAAAATCGA AAAGAAAGGT AAAGAAAACC GGCGTTTCCG AATACGATTC GCGGCGCCCG AGGATCGGGC CTTCGCCTGA
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Protein sequence | MTRSVTALFR EDFYLSTCEA SVTAILEDGG IELDQTCFYA TSGGQPGDKG FLEREDGSRI DIIDTRHGAT KDIILHIPAE GARMPDVGEK LVLHIDWPRR YRLMRMHTAC HLLSVVCPFP ITGAAVGEEE SRVDFDMSEL IDKDQVTAAL MKLVHENHPV YVQWITDEEL AANPAIVKSK NVRPPMGLGR VSLVCIGENS SVDSQPCGGT HVSETQEVGA IHIAKIEKKG KENRRFRIRF AAPEDRAFA
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