Gene Smed_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1332 
Symbol 
ID5322180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1419135 
End bp1419707 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content55% 
IMG OID640790274 
ProductphiE125 gp8 hypothetical protein 
Protein accessionYP_001327017 
Protein GI150396550 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.317203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGC GCCTTGCAAC GCCAGCTACG GCGGAGATTG TTACGCTCGC CGAGGCGAAG 
GCGCACCTTC GTGTCGACTT TACCGATGAT GACGCATACA TCACAGCACT TGCCGAGGCA
GCGCAGGATT GGCTTTCAGG CGAAAACAAC TGGCTCGGGC GATCGGTTGT GGAGCAGACC
TGGGAACTCA AGTTGGAGCG CTTCCCGTCT GGCAAGGTGG ACTTACCGAA GCCGCCGCTA
ATCGAGGTGA CTGGCGTTTT TTACACGCCA TCAGATGGCG GTGCTGAAGT CGAGATTACG
GATTTTCGCG AGATTGACCT CGGCGTCTCT GAGGGCGGGT ACATCCTTCC GGCAAAGAAT
ACAGATTGGC CAGACACCGA CGGCGAGCCT GGATCTGTCA GGATTACATT CGAGTCCGGA
TATTCTGACG TACCTAAATC CATAAAGCAC GCTGCGTTGC TCATGATTGG CCACTGGTAT
GAAAACAGAG AGGCCGCGAG CCAAGCAAAA ATAAGCGACC TGCCGATGGC GGTTGATGCG
CTCCTTTATC CTTACCGAAA CTGGCGCGCC TAA
 
Protein sequence
MSLRLATPAT AEIVTLAEAK AHLRVDFTDD DAYITALAEA AQDWLSGENN WLGRSVVEQT 
WELKLERFPS GKVDLPKPPL IEVTGVFYTP SDGGAEVEIT DFREIDLGVS EGGYILPAKN
TDWPDTDGEP GSVRITFESG YSDVPKSIKH AALLMIGHWY ENREAASQAK ISDLPMAVDA
LLYPYRNWRA