Gene Smed_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1317 
Symbol 
ID5322165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1409663 
End bp1410268 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content57% 
IMG OID640790259 
Producthypothetical protein 
Protein accessionYP_001327002 
Protein GI150396535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.535734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCA TATTGGCTGC GAGACTTGCA TGCTCTGTTC AGGATTGCGT TGAGCCCTGC 
GTTGCGCGAG GCTACTGCAA CACCCACTAC CGAAAGTTCA TGTACCACGG CGACCCGCTT
GCGGGCCGGA CGAAGAAGCC AGCGAAGAAA GGCGAACCGC TTCGGTGGCT GCTCGACCAC
GTCGCACACG CCGACAAAGA CGAATGCCTG ACGTGGCCAT TCTCACGTTT CCAAAATGGT
TACGGCCTGA TCGTGAAGGA CGGGGCAAGC TACGGCGCTC ATCGATACAT GTGCGAACTA
GTCAGCGGAG AGCCGCCGAC CCCGGAGCAC GTAGCCGCTC ATTCCTGTAA CAAGGGCAGA
GACGGATGCG TTAATCCCCA TCACCTTCGA TGGGCGACCA GCCAGGAGAA CACTCTTGAC
CGATTTGATC ACGGAACAAT GCCGACTGGC TCAGCATCGC ATTTCGCGAA GCTGACGCCG
GAGCAAGTCA GTGAAATTCG CAAAATAGGC CGATCAAGGA CACAGCGCGA TCTCGCCAAG
ATTTATGGCG TTTGCAAAAG CACCATTGGC TACATCGTCC GCGGCGAGAA CTGGGCTACC
AGTTAG
 
Protein sequence
MEAILAARLA CSVQDCVEPC VARGYCNTHY RKFMYHGDPL AGRTKKPAKK GEPLRWLLDH 
VAHADKDECL TWPFSRFQNG YGLIVKDGAS YGAHRYMCEL VSGEPPTPEH VAAHSCNKGR
DGCVNPHHLR WATSQENTLD RFDHGTMPTG SASHFAKLTP EQVSEIRKIG RSRTQRDLAK
IYGVCKSTIG YIVRGENWAT S