Gene Smed_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1291 
Symbol 
ID5322138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1387600 
End bp1388631 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID640790232 
ProductDNA polymerase III subunit delta' 
Protein accessionYP_001326976 
Protein GI150396509 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0826034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG AACATTCGGC TGTGCTGGAG GGCGCCCTTG CTCCGGCGAT GAACAGCAGG 
CTCTTCGGCC ATCAGGAAGC CGAAGCCTTC CTCGCGCAGA GTTATAAATC CGGCAAAGGT
CACCATGCCA TCCTGATCGA AGGACCTGAG GGGATCGGCA AGGCAACGCT CGCCTTTCGC
TTCGCCAACC ATATCCTCAG TCATCCGGAG CCCGCGGAGG CCCCCAGCAG GCTCGCCGAT
CCGGATCCGG AATCGATCAT CACGCGGCAG CTTGCTTCAG CCGCATCGCA CAATCTCCTG
CATCTTGCCC GGCCGGTCGA CGAGAAGACG GGCAGGGCGA AGGGTGCGAT CACCGTGGAC
GAAGTGCGCC GCGCCGGCAA ATTCTTCGGG CAGACATCCG GCACAGGAAA CTGGCGCATC
GTCATCGTCG ATCCGGCCGA CGACCTCAAT CGAAATGCGG CCAACGCCAT ATTGAAGATG
CTGGAGGAGC CGCCGCCCCG CTCGCTGTTC CTGGTGCTCA CCCATGCGCC CGGAAGGCTT
CTCCCCACGG TGCGGTCGCG TTGCCTGCCG TTGCGGCTGA AGCCGCTGGA GACGGCGGAT
CTGCGGCAGG CGCTGACGCA TCTTGGGGTC GATCTCGCCG GCCCGAATGC CGGTCGCGTC
CTCGCGGCGG CAAGCGGTAG CGTCTCGGAG GCGTTGAAGC TGGTGAATTA CGGCGGGCTT
GATATCGCCG AGGCGTTCGA GGACATTCTG GCCGGGCAGG GGCCGGGTTC CCGCAAAAGC
ATGCATAAGC TCGCTGACGT GCTTTCGGGC AGAGACAGCG AGACGATCTT CGATTTCTTC
TCGTCGCTAT TGGCGGGACG CATCATGCAA CTGGCGCGCG AGGCGGCAAT CGCCGGCGAT
GTGGGCAGGG CCGAGCGGTT CGCGAGACTT TCAAGCAGCG TGGGAGAACG CCTGGCGCTG
AGCAGCGCCT ACAATCTCGA TCGCAAGCAG ACGATCCTTT CCTTGCTCGA CGATCTCAAA
GAGGCTCTAT AA
 
Protein sequence
MSVEHSAVLE GALAPAMNSR LFGHQEAEAF LAQSYKSGKG HHAILIEGPE GIGKATLAFR 
FANHILSHPE PAEAPSRLAD PDPESIITRQ LASAASHNLL HLARPVDEKT GRAKGAITVD
EVRRAGKFFG QTSGTGNWRI VIVDPADDLN RNAANAILKM LEEPPPRSLF LVLTHAPGRL
LPTVRSRCLP LRLKPLETAD LRQALTHLGV DLAGPNAGRV LAAASGSVSE ALKLVNYGGL
DIAEAFEDIL AGQGPGSRKS MHKLADVLSG RDSETIFDFF SSLLAGRIMQ LAREAAIAGD
VGRAERFARL SSSVGERLAL SSAYNLDRKQ TILSLLDDLK EAL