Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1291 |
Symbol | |
ID | 5322138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1387600 |
End bp | 1388631 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790232 |
Product | DNA polymerase III subunit delta' |
Protein accession | YP_001326976 |
Protein GI | 150396509 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0826034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGG AACATTCGGC TGTGCTGGAG GGCGCCCTTG CTCCGGCGAT GAACAGCAGG CTCTTCGGCC ATCAGGAAGC CGAAGCCTTC CTCGCGCAGA GTTATAAATC CGGCAAAGGT CACCATGCCA TCCTGATCGA AGGACCTGAG GGGATCGGCA AGGCAACGCT CGCCTTTCGC TTCGCCAACC ATATCCTCAG TCATCCGGAG CCCGCGGAGG CCCCCAGCAG GCTCGCCGAT CCGGATCCGG AATCGATCAT CACGCGGCAG CTTGCTTCAG CCGCATCGCA CAATCTCCTG CATCTTGCCC GGCCGGTCGA CGAGAAGACG GGCAGGGCGA AGGGTGCGAT CACCGTGGAC GAAGTGCGCC GCGCCGGCAA ATTCTTCGGG CAGACATCCG GCACAGGAAA CTGGCGCATC GTCATCGTCG ATCCGGCCGA CGACCTCAAT CGAAATGCGG CCAACGCCAT ATTGAAGATG CTGGAGGAGC CGCCGCCCCG CTCGCTGTTC CTGGTGCTCA CCCATGCGCC CGGAAGGCTT CTCCCCACGG TGCGGTCGCG TTGCCTGCCG TTGCGGCTGA AGCCGCTGGA GACGGCGGAT CTGCGGCAGG CGCTGACGCA TCTTGGGGTC GATCTCGCCG GCCCGAATGC CGGTCGCGTC CTCGCGGCGG CAAGCGGTAG CGTCTCGGAG GCGTTGAAGC TGGTGAATTA CGGCGGGCTT GATATCGCCG AGGCGTTCGA GGACATTCTG GCCGGGCAGG GGCCGGGTTC CCGCAAAAGC ATGCATAAGC TCGCTGACGT GCTTTCGGGC AGAGACAGCG AGACGATCTT CGATTTCTTC TCGTCGCTAT TGGCGGGACG CATCATGCAA CTGGCGCGCG AGGCGGCAAT CGCCGGCGAT GTGGGCAGGG CCGAGCGGTT CGCGAGACTT TCAAGCAGCG TGGGAGAACG CCTGGCGCTG AGCAGCGCCT ACAATCTCGA TCGCAAGCAG ACGATCCTTT CCTTGCTCGA CGATCTCAAA GAGGCTCTAT AA
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Protein sequence | MSVEHSAVLE GALAPAMNSR LFGHQEAEAF LAQSYKSGKG HHAILIEGPE GIGKATLAFR FANHILSHPE PAEAPSRLAD PDPESIITRQ LASAASHNLL HLARPVDEKT GRAKGAITVD EVRRAGKFFG QTSGTGNWRI VIVDPADDLN RNAANAILKM LEEPPPRSLF LVLTHAPGRL LPTVRSRCLP LRLKPLETAD LRQALTHLGV DLAGPNAGRV LAAASGSVSE ALKLVNYGGL DIAEAFEDIL AGQGPGSRKS MHKLADVLSG RDSETIFDFF SSLLAGRIMQ LAREAAIAGD VGRAERFARL SSSVGERLAL SSAYNLDRKQ TILSLLDDLK EAL
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