| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1261 |
|---|
| Symbol | |
|---|
| ID | 5322108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1354379 |
|---|
| End bp | 1355287 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640790202 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001326946 |
|---|
| Protein GI | 150396479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.312596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACC TGCCTCTTGC CGATCTCGAT GCTTTCGCCG CAGTTGCACG CGAGCGCAGC
TTTCGCACGG CCGCGCGCAA GCGCGGCGTT TCCGCTTCTG CGCTCAGCGA AGCCTTGCGG
CGGCTGGAGG CAAAACTCGG CGTCCGATTG CTCAACCGCA CCACGCGCAG CGTCACGCCG
ACGGAAGCGG GCAAGCGCTT GCTCGAACGT TTGACGCCTG CGCTCGGCGA GATTGCCGGG
GCGCTCGACC AGGTCGCGAG CGAGCGCGAC AGCCCCGCGG GCACATTGCG GCTGAACGTT
CCGACCATCG TAGCAAGGGT TATTCTGCCG CCGCTCGTCG GCCGCTTCAT GAAAGCGCAT
CCGGCGATCA CGCTGGAGGT GACCGCCGAG GATGGCTTCA TCGATGTCCT TGCCGCGGGG
TTCGACGCCG GCGTGCGATA CGAAGAGCGG GTCGAGAAGG ATATGATCGC AATTCCCCTG
GGGCCGCGCG TACAGCGCTA CATCACTGCG GCGGCCCCGG ATTATCTTGC CCGCCGAGGC
GAACCGCAGC ATCCGCGTGA TCTCCTCGAG CACGCAACCG TGCGCCATCG CTTTCAGAAT
GGCGTGATGC TGCCATGGGA GTTCGGCGAG GGAGACGCGA CAATAATCAT CGCGCCACCC
TCAACCGTAC TCGCCAACAC GATCGAGCTC GAAATCAGCG CGGCTGTGGA CGGACTGGGG
GTGATCCGCA CATTCGAAGA ATTCCTGAAG CCGGAAATCG AGGCCGGGCG ACTGATTACG
GTCCTTGACG CCTGGGAAAC GAGTTTTCCC GGGCCGTTTC TTTATTATGC GGGTCGCAGA
CATCTGCCGG CACCTCTCCG CGCCTTTGTG GATTTCTTGA AGTCCGAGCA GCGGCAGGCG
GGGCGGTGA
|
|---|
| Protein sequence | MNDLPLADLD AFAAVARERS FRTAARKRGV SASALSEALR RLEAKLGVRL LNRTTRSVTP
TEAGKRLLER LTPALGEIAG ALDQVASERD SPAGTLRLNV PTIVARVILP PLVGRFMKAH
PAITLEVTAE DGFIDVLAAG FDAGVRYEER VEKDMIAIPL GPRVQRYITA AAPDYLARRG
EPQHPRDLLE HATVRHRFQN GVMLPWEFGE GDATIIIAPP STVLANTIEL EISAAVDGLG
VIRTFEEFLK PEIEAGRLIT VLDAWETSFP GPFLYYAGRR HLPAPLRAFV DFLKSEQRQA
GR
|
|---|
| |