| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1230 |
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| Symbol | |
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| ID | 5322077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1311269 |
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| End bp | 1312345 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790171 |
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| Product | patatin |
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| Protein accession | YP_001326915 |
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| Protein GI | 150396448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.17654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.350334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACG AGGCTCCGCC GAAGCCGAGA TCGCGAAGGT CTGAAGGAAC ACGTCCGGAT
CTCCGTCCTC CGCTTCCCTG GCATTCCGGC GACATGCGCA TACTCTCGAT CGACGGAGGC
GGGATACGTG GAATCTTGCC GGCGGCCGTG CTCGCCCATT GCGAAGATCG CTTCTGCAAC
GGACGGCCTG CAGGCGAGTT CTTCGATTAT CTCGCCGGAA CGTCCACCGG AGGCATCATC
GCGCTTGGCC TTTCGATCGG GCTCTCCGCG AAAGACATCC TTTCGATCTA CATGGACCAC
GGCGCGGAGA TCTTCCCTCC CCGCCGCCAC TATCGAAACC GGACAATACG CAAACTTCAG
TCGGCATGGC ACTTTCTGCG TAACTTGAAC CAGTACAAGT ACGAGCGAGA GGCGCTGCGA
CGGAATCTTG CAGCGACTTT CGGCGAGAGA CTGCTCGGTG ACGCTGAACG GCGGTTGGTG
ATCCCGTCCT TCGACGAATA CAACGAGGTG CACCTCTTTA AGACCCCTCA TCATCCGGAC
TACCAGCGTG ACTGGAAGGA GAGGATGATC GATGTCGCGC TGTCGACTTC GGCCGCCCCG
ACCTTCTTCT CGACTTACCG AAACGGCGAC CGGCATTTTG CGGATGGAGG GGTCTGGGCC
AACAACCCGG TGATGACCGC CCTCGTAGAT GCCCTCGCCT GCCACGAGAT TGATCGCAGG
AACGTCCAGG TACTGTCACT AGGATGCATC GAGTCTGACT TCGCGTTTTC CGAGGGGCAG
ATATCGAAAG GCGGTTTGTG GCATTGGAAG GAAATCATCT CTTCCGCCAT GAGGTTGCAG
AGCCAGAATG CGCTGGGACA AGCTGGGCTT TTGTTAGGCC GCGATCACCT TCGACGAATC
GACGGCGCGC CGATGACGGA TGACCCCATC GTTCTCGACG ACTACCAACG CGCCGCCGCA
GAGCTCCCTG CAATCGCGAG GCGCCTGGTC GATGACAACA GCGAGCGCCT GGCTCACTTC
TTCAGTCAAC CGCGACCTCC GTTCGACGCT TTTCATGGCC CCAGGCACAC GGACTGA
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| Protein sequence | MQHEAPPKPR SRRSEGTRPD LRPPLPWHSG DMRILSIDGG GIRGILPAAV LAHCEDRFCN
GRPAGEFFDY LAGTSTGGII ALGLSIGLSA KDILSIYMDH GAEIFPPRRH YRNRTIRKLQ
SAWHFLRNLN QYKYEREALR RNLAATFGER LLGDAERRLV IPSFDEYNEV HLFKTPHHPD
YQRDWKERMI DVALSTSAAP TFFSTYRNGD RHFADGGVWA NNPVMTALVD ALACHEIDRR
NVQVLSLGCI ESDFAFSEGQ ISKGGLWHWK EIISSAMRLQ SQNALGQAGL LLGRDHLRRI
DGAPMTDDPI VLDDYQRAAA ELPAIARRLV DDNSERLAHF FSQPRPPFDA FHGPRHTD
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