| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1212 |
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| Symbol | |
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| ID | 5322059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1294901 |
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| End bp | 1296712 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640790153 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_001326897 |
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| Protein GI | 150396430 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.212928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.488565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG AATCTCACGG ACCAGACCTC CTACCAGTCA TCGCGCTACT CGGCGCGGGG
GTTGTTGCGG CCACGGTCTT CAAGCGATCT GGACTTGGCT CCGTCCTGGG TTATCTCGCC
GCGGGCGTCG TCATCGGTCC ATTCGGGCTT CGGGTATTTC AAGAGCCGGC ATCCATTCTC
CATTTCGCTG AGCTGGGCGT CGTAATGTTT CTCTTCCTGA TAGGCCTTGA GATGAGGCCT
TCACGACTTT GGGGTTTGCG CAGGCAGATT TTTGGCCTGG GAGTCCTTCA GGTCGGCGTC
TGCATTCTTT GTCTCACGGC AGTCGGTATG GCGACTGGTT TCCCGGTGGC GCCGTCCTTC
GTTGCGGGGA CGGGATTCGT GCTTACATCG ACGGCAATTG TGATGCAGCT CCTTGAGGAG
CGAGGTACGA TCTCTACGCC ACCTGGCCAG CGCATCGTAG CCATCCTGCT CCTTGAGGAT
TTAGCGATCG TACCGCTCCT CGCGTTGGTC GCCTTTCTGG CCCCCATCGT TCCTGGCACG
ACTTCGAGTG CTCAAGGAAT CGACTGGATT GCAATAGGCG TGGGCGTCGC CGCGATAGCG
GGAGTCGTAG TCTCCGGCTT GTATCTCCTA AACCCTCTCT TTGGGCTTAT AGCCGGCGCA
CAGGCGCGTG AGGTTATGAC GGCCGCAGCG TTGCTCGTCG TACTTGGCGC CGCTTATGTG
ATGCAGCTTG GCGGGCTGTC CATGGCGATG GGCGCGTTCC TTGCAGGCGT TCTCCTGTCC
GAGTCAACGT TCCGACACCA GCTAGAAGTC GATATCGAAC CCTTTCGCGG TATCCTCCTG
GGTCTCTTCT TCCTCGCTGT CGGTATGTCT CTTGAGTTGG GTGTCGTGGC GGCCGACTGG
GAGCTGATTG CGTTCTATGT TGCCGCATTC ATGATCGTGA AAGGGCTAGC AGTTTACGGC
TGTGCTCGCC TTCTTAAAAG TACGCACTGG GAAGCCGCCG AGCGAGCCGT TCTTATGGCC
CAGGGTGGGG AATTTGCCTT CGTACTCTAT GCATCGGCTC TCTCATTCGG GATCATCTCT
TCCGACCAGA ATGCTGTTCT GACAGCAATC GTCATCCTGT CGATGGTTCT CACGCCGCTT
CTAGTCTTGA TCTTGAAGCG GTTCGAAGGA GCGAGTTCTT CACGGGTCGA TGGCTACGCA
ATTTCCGGCA ATTTAAGAGG TACGGTTCTG ATCATCGGCT TCGGCCGGGT CGGACAGATA
GTCAGTCAGC TTCTGCTATC CCGAGGTCAC GAGATTTCCA TCATCGACAC CGATGTCGAG
ATGATCAACA TAGCTCGTGA ATTTCAGTTC GACGTCTACT ACGGCGACGG CACACGTCTC
GATATCCTTG AGACGGCGGG TGCTGGTGAG GCGAAGGTGA TAGCTGTGTG CGTGGACAAC
GGCGACGACG TCACAGCTAT TGTACGCCTG CTCAAAGCTG AATTTCCTCT GGCAACAATT
GTCGCCCGAG CAACGGATCG GCGGCATGCA CTCGACCTGG TCAGATCGGG TGCCGATGTC
CAGATCCGAG AAACCTTTGA GTCCGCGATG GCGCTGGGCA ACAAGGCGCT TGAAATTCTT
GGGGCCACGC CGGAAGAAAT GTCGAATCTG GCGAAGGGAT TTCGGGAGCG TGATGGCGCG
CGGCTTGAAC TCGAATTGGT TGGAGGGATG TATGCTGGCC GCGAATTCTT CAGTGGAAGG
ACTCACGCAT CGAAAATCAC GGCGGAGATT GATGCTTCCG AGAAAATGCG GGACTTCAGG
TCGACCCCGT AG
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| Protein sequence | MAVESHGPDL LPVIALLGAG VVAATVFKRS GLGSVLGYLA AGVVIGPFGL RVFQEPASIL
HFAELGVVMF LFLIGLEMRP SRLWGLRRQI FGLGVLQVGV CILCLTAVGM ATGFPVAPSF
VAGTGFVLTS TAIVMQLLEE RGTISTPPGQ RIVAILLLED LAIVPLLALV AFLAPIVPGT
TSSAQGIDWI AIGVGVAAIA GVVVSGLYLL NPLFGLIAGA QAREVMTAAA LLVVLGAAYV
MQLGGLSMAM GAFLAGVLLS ESTFRHQLEV DIEPFRGILL GLFFLAVGMS LELGVVAADW
ELIAFYVAAF MIVKGLAVYG CARLLKSTHW EAAERAVLMA QGGEFAFVLY ASALSFGIIS
SDQNAVLTAI VILSMVLTPL LVLILKRFEG ASSSRVDGYA ISGNLRGTVL IIGFGRVGQI
VSQLLLSRGH EISIIDTDVE MINIAREFQF DVYYGDGTRL DILETAGAGE AKVIAVCVDN
GDDVTAIVRL LKAEFPLATI VARATDRRHA LDLVRSGADV QIRETFESAM ALGNKALEIL
GATPEEMSNL AKGFRERDGA RLELELVGGM YAGREFFSGR THASKITAEI DASEKMRDFR
STP
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