| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1163 |
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| Symbol | |
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| ID | 5322009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1240498 |
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| End bp | 1241616 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790104 |
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| Product | ABC transporter related |
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| Protein accession | YP_001326849 |
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| Protein GI | 150396382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0455034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.217765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA TGGCTTCAGA TGCGCGCAAC GGCGCCGTCA TGATGACGAG GCGCTCTGGA
GTGTCGTTCG CGGCGAATCT TGCATTCGAG AATATCAGCC ATCGCTACCA TTCCAAGGAT
ACGATAAAGG GCGTCACGCT CAAGGCTGAA GCCGGCGAGG TTCTCTGCCT GCTCGGACCC
TCCGGCTCAG GCAAGACAAC GCTGTTGCGT ATTGCCGCGG GCATCGAGAT GCAAACGGGC
GGGCGCCTTC TGCTGAACGG GCAGGAGATA TCAGGTCCTT CCGTTTTCGT CCCGCCGGAA
AAACGCGGCG TCGGATTGAT GTTCCAGGAC TTCGCGCTCT TCCCTCATAT GACCATCCGC
GAGAACGTTT GTTTCGGCTT GACCGAACTG CCGAAGAACA AGGCGTTGAT GCAAGCCGAT
ACTGCCCTGG AGCGGGTGGG CCTTCTGCAC TATGCCGAGC GGTATCCACA TGTGCTCTCG
GGCGGCGAGC AGCAGCGCGT AGCGCTCGCC CGTGCCCTTG CGCCGCGGCC GGCGGTTCTC
CTGATGGATG AACCCTTTTC CGGCCTTGAT TCGCGCCTGA AGGATTCCAT TCGCGCCGAC
ACGCTTGCGA TCCTGCGCGA AACGCGGGCG ACCGCCATCG TGGTAACGCA TGATGCCGAG
GAGGCGATGC GCATGGCTGA CCGGATCGCG CTTTTGAGAG ACGGCCGGCT GATACAGGTC
GGCACGGCTG ACGAGCTCTA TCGCCGCCCA TGCGATCTTT TCACTGCCGG ATTCTTTTCG
GAGATAAACG TCTTCGACGG TCGCGTGCGC GATGGCCGTG TCGAAACACC GCTGGGAGTT
GTGGCTGCGG GACAATATGC GGAAGGCCAG TTGCTGAACG TAGCGGTTCG GCTCTCCGGC
ATCCATCTTG ACGAGGAGGG CGGAGAAATT CCGGCGCGGA TCGTGTCCAG GCGCTTCCTC
GGGGTCGTTG AGCTTCTGGA ACTTGCCGTG CCGCAGTCCG AACGAACGGT CAGGGCTCGC
ATCCGTGCCG ATTTGCTGCC GCAAGGATTG CGTGACATCA CGCTTTCCGT TAACGAGCGC
GATATATTGG TGTTTGAAAA AGACGCATCA ACACCTTAG
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| Protein sequence | MQSMASDARN GAVMMTRRSG VSFAANLAFE NISHRYHSKD TIKGVTLKAE AGEVLCLLGP
SGSGKTTLLR IAAGIEMQTG GRLLLNGQEI SGPSVFVPPE KRGVGLMFQD FALFPHMTIR
ENVCFGLTEL PKNKALMQAD TALERVGLLH YAERYPHVLS GGEQQRVALA RALAPRPAVL
LMDEPFSGLD SRLKDSIRAD TLAILRETRA TAIVVTHDAE EAMRMADRIA LLRDGRLIQV
GTADELYRRP CDLFTAGFFS EINVFDGRVR DGRVETPLGV VAAGQYAEGQ LLNVAVRLSG
IHLDEEGGEI PARIVSRRFL GVVELLELAV PQSERTVRAR IRADLLPQGL RDITLSVNER
DILVFEKDAS TP
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