| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1155 |
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| Symbol | |
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| ID | 5322001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1229573 |
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| End bp | 1231036 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790096 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001326841 |
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| Protein GI | 150396374 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.894143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT TCGTAGAGAG TTATTGGCCG CATTTTCTGG CACTGCTGTC CATCGCCCTG
GGCGTTCCGG CGATCATCCA TGCCGCTATG ACGAAGGATG ACGTGCGTGC GGCCGCCGGC
TGGGTCGGGG TCGTCCTCCT GTCACCGGTC ATCGGTGCAG TCATCTACGC GGTCGCCGGT
ATCAACCGGA TGCGCCGCTC GTCCATCGGC CTGCAGCGTT CCTTGCTGCG CTCGACGGAG
CGGGACCCGT TCGGGCGCTT CGATATCACG CATGATCAGG TGGTGGCGCG CTTCGGGCAG
CGTTTTGCGG CAATGAAGAT GCTTGGGGAC CGGGTCGCAC GCTTTACGAT GTCAGCCGGA
AACCGCATCA CCATGCTCGA GGGCGGCGAC GCGGTCTATG CGGCGATGCT CGACGCGATT
TCGTCCGCCC GCCGAAGTAT TCTCATCGAG AGCTATATTT TCGACCGTGA TGCCATCGGC
ATGCGTTTTG CCGACGCCCT GATCGCCGCA GTCAAACGCG GTGTCAGCGT GCGCGTCCTG
ATTGACGCCG TCGGCGCTCG CTACTCCGTG CCGAGTATCG TGGGCTACCT CAAGGAAGGG
GGCGTGCCGA CCGCCGTCTT CAACGGCAAT ATCATCATGG GTCTGAGGCT GCCCTATGCA
AATCTCAGGA CCCACCGCAA GATCGTGGTC ATCGATGGCG CGGTCGCCTT CGCCGGGGGC
ATGAACATTC GCGCAGGTTT TGCCGCTGAA ATCGTAGGCA GCGCGGCTTC TTTCGACACG
CATTTCCAAG TAACCGGGCC GGTCGTCTCC GACATCTTTC AGGTTGCCGC GGAAGACTGG
CAGTTTTCGA GCGAAGAGGT GCTGGCGGGT GACGCCTGGC GCCTTGCCGA CCTCCCGGTT
GAGCCGGATG TGGGGTCGGT GCTGATGCGA GCAGTTCCCT CGGGGCCTGA CAACACCAAT
GAGACCAATC ACAAGATGCT TATGGGCGCT TTTTCGATTG CGCGAAAGCA TATCCGGTTG
ATGTCGCCAT ATTTCCTGCC GGACAAGGAA TTGGTCAGCG CGTTGGTGAC TGCTGCAAGG
AAAGGCGTCG AGGTCGACAT CATCGTACCC TCCGTCAACA ATCTGACACT CGTCGACCGA
GCGATGACGG CACAGTTCGA CCAGGTGCTG AAAGGCCATT GCCGAGTGTG GAGGGCGAAA
GGTGCCTTCA ACCATTCCAA GCTGCTGGTC ATCGACGATC GCTGGGCCTA TGTCGGTTCG
ACCAATCTGG ATCCCCGTTC CCTGCGCCTC AATTTCGAGT TCGATCTCGA AATACTCGAC
GAAGCCTTCG CCCGTGCGAT CGGTGAAAAG GTCTGTGCAA TACGAGCGAC CGCGGACGAG
GTGACGCTTG CAGGTCTGCG CGCGCAGCCG CTCGTCAACC GCCTGGCGAA TCGCTTGCTC
TGGCTCGGAT CGCCATATCT TTAG
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| Protein sequence | MIAFVESYWP HFLALLSIAL GVPAIIHAAM TKDDVRAAAG WVGVVLLSPV IGAVIYAVAG
INRMRRSSIG LQRSLLRSTE RDPFGRFDIT HDQVVARFGQ RFAAMKMLGD RVARFTMSAG
NRITMLEGGD AVYAAMLDAI SSARRSILIE SYIFDRDAIG MRFADALIAA VKRGVSVRVL
IDAVGARYSV PSIVGYLKEG GVPTAVFNGN IIMGLRLPYA NLRTHRKIVV IDGAVAFAGG
MNIRAGFAAE IVGSAASFDT HFQVTGPVVS DIFQVAAEDW QFSSEEVLAG DAWRLADLPV
EPDVGSVLMR AVPSGPDNTN ETNHKMLMGA FSIARKHIRL MSPYFLPDKE LVSALVTAAR
KGVEVDIIVP SVNNLTLVDR AMTAQFDQVL KGHCRVWRAK GAFNHSKLLV IDDRWAYVGS
TNLDPRSLRL NFEFDLEILD EAFARAIGEK VCAIRATADE VTLAGLRAQP LVNRLANRLL
WLGSPYL
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