| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1146 |
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| Symbol | |
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| ID | 5321992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1217427 |
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| End bp | 1218404 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790087 |
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| Product | TonB-system energizer ExbB type-1 |
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| Protein accession | YP_001326832 |
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| Protein GI | 150396365 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATC GGGTCCGGTC GAAATTGAAC CTGTTGCTGA CCGCAATGCT CACTGTCTTT
CTTTTCGGTC CGGTTGGTGC CGGGCTTGCG CAGACCGCAC AACAGCCCAA TTCCGTTTCG
GTCGACGCCC AGCCTGCGGC GCCGGACGTG TCGGGCGCCG ATGGACCGCT CCTGCAGGCG
GGCGAGTCGG TCGAGGCAGC GACGGACGGC GCAACGGCGG AGGGAGCGAA CCCGGTGCTT
CCGCACGATC TCTCGCCGGT TGGAATGTTT CTTGCCGCCG ATATCGTCGT TAAAGCGGTG
ATGATCGCTC TTGCGCTTGC ATCCGTCGCA ACCTGGGCGA TCTTCATCGT CAAGACGCTG
GAACTCGCCT ATGCCAAGTC GCGTCTCAAG CGCGCCGTAG CAAATCTCGT TTCGGCAAAT
GGCCTGGCCG AGGTTCATTC CAAGCTCGAG CGCCGCTCCG GCGTCGCCGG AAACATGGTC
ACTGCGGCGA TCGACGAAAT GACACGCTCC GAGGCCGTTC TGGATCTTAC GCCGTCAGCC
GGGGTGAAGG AACGCGTCTC TTCGCTGCTT ACGCGTATAG AGGTTCGCGC CGGCAAGAGG
ATGAGCGCCG GTACCGGGAT TTTGGCCTCC ATCGGGTCCG TCGGACCGTT CGTTGGCCTC
TTCGGTACCG TCTGGGGTAT CATGAATTCC TTCATAGGCA TCAGCAAGGC GCAGACAACC
AACCTCGCCA TTGTTGCGCC GGGTATTGCA GAGGCGCTGC TGGCGACGGC AATAGGACTC
GTCGCGGCGA TACCTGCGGT GGTGATCTAC AATTACTTCG CCCGGTCGGT CGGGGGCTAC
AAGCTCATCC TTGCGGATGC GGGAGCAGCC GTTGAGAGGT TGGTAAGCCG CGATCTGGAT
CATCGTCACG CCCGCAAAGC GTCGCGCCGC CAGGACAGCT TCACCCACGG CCCAGACGCT
ATCGCCAGAA TCGGATAA
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| Protein sequence | MSDRVRSKLN LLLTAMLTVF LFGPVGAGLA QTAQQPNSVS VDAQPAAPDV SGADGPLLQA
GESVEAATDG ATAEGANPVL PHDLSPVGMF LAADIVVKAV MIALALASVA TWAIFIVKTL
ELAYAKSRLK RAVANLVSAN GLAEVHSKLE RRSGVAGNMV TAAIDEMTRS EAVLDLTPSA
GVKERVSSLL TRIEVRAGKR MSAGTGILAS IGSVGPFVGL FGTVWGIMNS FIGISKAQTT
NLAIVAPGIA EALLATAIGL VAAIPAVVIY NYFARSVGGY KLILADAGAA VERLVSRDLD
HRHARKASRR QDSFTHGPDA IARIG
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