| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1143 |
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| Symbol | lpxB |
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| ID | 5321989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1211820 |
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| End bp | 1213019 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790084 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001326829 |
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| Protein GI | 150396362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0582133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.762709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA GAGCCTACAG GCTGGCGGTC ATCGCCGGCG AAGTTTCCGG CGACCTGCTC
GGCGCCGACC TCGTGCGGGC CCTGCGCGAT CGGGCGGACG GTACCGTCGA ACTCGTTGGT
ATCGGCGGCG AGGCACTCGA GGCCGAAGGG CTTCGGCCGT TGTTCGACTA TTCCGAACTC
TCGATCATGG GCTTCTCGCA GGTCCTGGCA AATCTTCCCA AGCTCCTGGC GCGGATTCGA
CAGACCGCGA GCGCGATCAC CGCTGCGCGG CCGGATGCTC TGGTTATAAT CGACAGCCCC
GATTTCACTC ACCGAGTGGC GCAGCGCGTC CGCGCCGCAC TGCCGGACTT GCCGGTGATC
GATTATGTCT GCCCGAGCGT CTGGGCATGG AAGCCGGAAC GGGCGCCGCG CATGCGGGCT
TATGTGGATC ACGTGCTGGC GGTTCTGCCG TTCGAACCGG ACGTGATGGT GAAACTCGGC
GGCCCGCCGA CCACCTATGT CGGTCACAGG CTGGCATTGG ACAGCAACGT GCTTGCCGTA
CGGCAGCGCC AGCGGCTGAA GCAACAGGCG CAGGAACCGG GCGGGGCGAA CGCCTGTCTC
CTGTTACCCG GCTCACGCGG AAGCGAGATC AGCCGCCTGC TGCCTGTCTT TCGCGACACA
GTCGAAGAAC TCGCTGATCG GAACGAAGGC ATCCGCTTCC TTCTGCCAAC TGTGCCTCGG
CAGGAAGAAC GGGTGAGGGC GATGACGGCC TCCTGGAGGG TGCAACCCGC GATCAGTGTA
ACTTCGGAAA GGAAATGGGA GGCTTTCGCC GAAGCCGACG CGGCCATAGC CGCATCGGGT
ACGGTTATCC TCGAGCTGGC GCTCGCCGGC GTTCCCGTCG TCTCCACCTA TTCTGCCGAC
TGGCTCGTAA GCCTCCTGCA TTCCCGCATC CGGATCTGGA CCGCAGCGCT TCCGAACCTG
ATCGCGGATT TTCCGGTCGT TCCGGAATAT TTCAACAAGA TGATACGGCC GGCCTCCCTG
ACGCGCTGGT TCGAGCGGCT TTCCTGTGAC ACGCCTCAAC GACGCGCGAT GCTCGACGGG
TTCGCGCTCG TGCAGCAGCG AATGGAGACG GATCGTCCGC CAGGCGAAAA GGCGGCGGAC
ATCGTTTTGA CCTATATTCA AGCGGGGCGG AAGGGATCCT CGGGTCAAGC CAAAGGATGA
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| Protein sequence | MTDRAYRLAV IAGEVSGDLL GADLVRALRD RADGTVELVG IGGEALEAEG LRPLFDYSEL
SIMGFSQVLA NLPKLLARIR QTASAITAAR PDALVIIDSP DFTHRVAQRV RAALPDLPVI
DYVCPSVWAW KPERAPRMRA YVDHVLAVLP FEPDVMVKLG GPPTTYVGHR LALDSNVLAV
RQRQRLKQQA QEPGGANACL LLPGSRGSEI SRLLPVFRDT VEELADRNEG IRFLLPTVPR
QEERVRAMTA SWRVQPAISV TSERKWEAFA EADAAIAASG TVILELALAG VPVVSTYSAD
WLVSLLHSRI RIWTAALPNL IADFPVVPEY FNKMIRPASL TRWFERLSCD TPQRRAMLDG
FALVQQRMET DRPPGEKAAD IVLTYIQAGR KGSSGQAKG
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