Gene Smed_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1102 
Symbol 
ID5321948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1172389 
End bp1172889 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID640790043 
Producthypothetical protein 
Protein accessionYP_001326788 
Protein GI150396321 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.386124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA TCTGGAATGA AGCCGGCTTC GTGAGCGACG ATCCCTGGGT CATCGAGAGC 
GAAGACACCA AGGCCGGATC GAACGAGAAG GCGATCCTGA GCCTCGATGG CTTCCTGTCA
GCAATTTCTG AAAGCGATGC CTCGGACCTT GGCGTTCTGA TCAATCCCGC TGATGATGTG
ATGCGGCTTG GCCCTTGCCT GGATCGGATC GCCCTGGTGG CCGTGGCATT TCCCGCTTTC
AGTGACGGGC GTTCCTTCAG CCACGCTTCG CTGCTGCGCT CGCGCCTTGG CTACGAAGGT
GAGCTTCGCG CAGTCGGCGA TGTGCTGATC GATCAGATCC CGCTGATGCT GCGCTGCGGC
GTCGACAGTT TCGCCGTAAC CAACGCCACG GCGATCAAGC GGCTTTCGGA GGGGCGGCTG
CCGGGGATCT CCACCCACTA CCAGCCGGCC GCGAAGCCCT CCGCCAACAT CAATTCCTAC
AGCTGGCGCC GCGTCTCCTG A
 
Protein sequence
MTKIWNEAGF VSDDPWVIES EDTKAGSNEK AILSLDGFLS AISESDASDL GVLINPADDV 
MRLGPCLDRI ALVAVAFPAF SDGRSFSHAS LLRSRLGYEG ELRAVGDVLI DQIPLMLRCG
VDSFAVTNAT AIKRLSEGRL PGISTHYQPA AKPSANINSY SWRRVS