Gene Smed_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1070 
Symbol 
ID5321916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1138390 
End bp1139280 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID640790013 
Producthypothetical protein 
Protein accessionYP_001326758 
Protein GI150396291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.566405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAA CCAAGCGAAC CGCCCGCCCG CTCGATCATC TCGTGCTGCC GGTGGGCGAT 
CTCGCGCGGA CAAGGCAGCG TCTTGCGGAT CTCGGCTTCA TCGTTGCCGA TGAAGCGCGC
CATCCCTTCG GCACGGCAAA TGCCTGCGTC TTCTTCTCGG ACGGTACCTA TCTGGAGCCG
CTCGCCGTCG CTTTGCGGGA GGAATGCGAG GCAGCGGCGC TCGACGGCAA CACTTTCGTC
GCACGTGACC AGGCGTTCCG GTTCCGGCGC GGGCAGGAGG GTCTGTCCGC CGTGGTGCTC
GGGACTCCGG ACGCGGCCGA AGATCACATC CGTTTCCGCG CTCGCGGTAT CTCCGGCGGT
GAAATGCTTG AATTCTCCCG GCCAATGCGC CTGCCGGACG GGCGCGAAGC GCTCGGTTCC
TTCAGGCTTG CTTTTGCAGC GGACCTGCGC TCCCCGGATC TTTTTCTTTT TACTTGCCAG
CGCCTGCGTG CTCTGCCGGT CGACAGCAGC GCGCTTCACC ACCACGAGAA CGGCGTGCTG
GGCATCGCCG AGGTCGTTCT TTCGGAACAG AACCCGACGG ATTTCCAGTA TCTGCTGCAG
GAAGCGGTGG ACGAGCGCGA GGTGTCGGCC CATTCATTCG GCATGGACAT TCAGGCAGGC
AGCGCCAAGA TTACAGTATT GACGCCGGCA GGTGTCGAGG CATTCTTCGG TCACGCGGTC
GAGGGTGCGG AACGGGGCTT GCGCGGGCGT GCCGTGGTTT TCCGTGTGGG CGATCTGGAA
GCCACACGCG CGCTTTTCGC GCAGAATGAT ATCGAATTCG CAGAGATGGG CGGACGCCTC
ATCGTTCCGG AAGCGCCGGG GCAGGGTGTA ACTTTCGCCT TTGGAGTATG A
 
Protein sequence
MSQTKRTARP LDHLVLPVGD LARTRQRLAD LGFIVADEAR HPFGTANACV FFSDGTYLEP 
LAVALREECE AAALDGNTFV ARDQAFRFRR GQEGLSAVVL GTPDAAEDHI RFRARGISGG
EMLEFSRPMR LPDGREALGS FRLAFAADLR SPDLFLFTCQ RLRALPVDSS ALHHHENGVL
GIAEVVLSEQ NPTDFQYLLQ EAVDEREVSA HSFGMDIQAG SAKITVLTPA GVEAFFGHAV
EGAERGLRGR AVVFRVGDLE ATRALFAQND IEFAEMGGRL IVPEAPGQGV TFAFGV