Gene Smed_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1065 
Symbol 
ID5321911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1133667 
End bp1134272 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID640790008 
ProductYceI family protein 
Protein accessionYP_001326753 
Protein GI150396286 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCT TACGCAGGCC CATGGGAGCG GCATTGCCGC GCGCGCTCGT CGCGCTCTTC 
GCTCTTGCGG GAACGCCGGC CCTCGGCGCG AAAGCACCGG CGCTCGTGGA TGCTGCCGGA
ACCTACCGCA TCGCCAGTTC TTCCACTGTC CGGTTCAGCG TCGGACAAGT GGGTGGCAGC
GGCGGCATCG CCGGCAGTTT CACCAAATTC TCGGGAACGT TCCGGATCGA TGGCGACGAT
ATCGGCGAAT CCTCCGTGGA ATTCACGCTC TATCCTGAGA GCGTGAATTC CACCGAGGGT
CGCATCGAAG ACTTCCTGCG CTCCAGCGCC GTGTTCGATG CGGTCAATTA CAGGACCGTG
ACCTTCCGCT CCACCGCCGT CAGTCAGACG GGCCCGGATA CCGCAACGAT CGAAGGCACC
CTCACCGTCC GGGGCAAGAG CCGCAAGGAG CGCTTTGCCG TGGCGCTCAC CGATTGGAAC
AGGCGCTCGA TTTCCTTCAC CATCCGCGGA AGCGTTCGCC GCTCGCCCTA CGGCATGACG
GTCGGGACGC CGATTTACTC CAACGTCGTG GAATTCAACA TGAACATTAG GGGGCAGAAA
CGGTAG
 
Protein sequence
MTSLRRPMGA ALPRALVALF ALAGTPALGA KAPALVDAAG TYRIASSSTV RFSVGQVGGS 
GGIAGSFTKF SGTFRIDGDD IGESSVEFTL YPESVNSTEG RIEDFLRSSA VFDAVNYRTV
TFRSTAVSQT GPDTATIEGT LTVRGKSRKE RFAVALTDWN RRSISFTIRG SVRRSPYGMT
VGTPIYSNVV EFNMNIRGQK R