Gene Smed_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1021 
Symbol 
ID5321866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1090778 
End bp1091611 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID640789963 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001326709 
Protein GI150396242 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.444109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA TCTCGCAAAA CACCGCCTTC GGAGGCATGC AAGGCGTGTT CGCTCATGAT 
TCCGACGCCT GTAAAGGCGA AATGACCTTT GCGGTTTTCG TCCCGCCTCA GGCGATCGTG
GAGCCTCGCC CGGTTCTCTG GTATCTCTCC GGCCTTACCT GCACCCATGC CAATGTCATG
GAAAAAGGCG AGTACCGGCG CATGGCTGCG GAACTCGGGC TTATCGTCGT CTGCCCGGAT
ACGAGCCCCA GGGGAGCAGA CGTCCCGGAT GATCTGACCA ACTGGCAGAT GGGCAAGGGA
GCCGGCTTCT ATCTGGATGC AACGGAGAAG CCCTGGGCCG AGCACTATCG GATGTACAGC
TACGTCACCG AGGAACTCCC GGCCCTGGTC GGCCAGCATT TCCGCGCGGA TATGAGCCGC
CAGGGGATTT TTGGGCACTC GATGGGCGGA CACGGCGCGA TGACGATCGC CCTGAAAAAC
CCCGAGCGCT TCAGAAGTTG CTCCGCCTTT GCGCCGATCG TCGCCCCTTC TTCCGCCGAT
TGGTCGGTCG GTGCCTTTGA AAAATACCTC GGCTCCGACA TGGCGCCCTG GCGCAGGTAC
GACGCCTGTG CCCTCGTCGA GGACGGCGCC CGCTTCCCGG AATTCCTAAT CGATCAGGGC
AAGGCGGACA ACTTCCTCGA GAACGGTCTG CGCCCATGGC TGTTCGAAGA AGCGGTGAAA
GGAACCGGAA TCGGCCTGAC GCTCCGGATG CAGGAGCGCT ACGATCATTC CTATTACTTC
ATCTCGACCT TCATGGACGA CCATCTGAGG TGGCACGCAG AAAGGCTCGG CTGA
 
Protein sequence
MKVISQNTAF GGMQGVFAHD SDACKGEMTF AVFVPPQAIV EPRPVLWYLS GLTCTHANVM 
EKGEYRRMAA ELGLIVVCPD TSPRGADVPD DLTNWQMGKG AGFYLDATEK PWAEHYRMYS
YVTEELPALV GQHFRADMSR QGIFGHSMGG HGAMTIALKN PERFRSCSAF APIVAPSSAD
WSVGAFEKYL GSDMAPWRRY DACALVEDGA RFPEFLIDQG KADNFLENGL RPWLFEEAVK
GTGIGLTLRM QERYDHSYYF ISTFMDDHLR WHAERLG