Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1021 |
Symbol | |
ID | 5321866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1090778 |
End bp | 1091611 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789963 |
Product | S-formylglutathione hydrolase |
Protein accession | YP_001326709 |
Protein GI | 150396242 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.444109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA TCTCGCAAAA CACCGCCTTC GGAGGCATGC AAGGCGTGTT CGCTCATGAT TCCGACGCCT GTAAAGGCGA AATGACCTTT GCGGTTTTCG TCCCGCCTCA GGCGATCGTG GAGCCTCGCC CGGTTCTCTG GTATCTCTCC GGCCTTACCT GCACCCATGC CAATGTCATG GAAAAAGGCG AGTACCGGCG CATGGCTGCG GAACTCGGGC TTATCGTCGT CTGCCCGGAT ACGAGCCCCA GGGGAGCAGA CGTCCCGGAT GATCTGACCA ACTGGCAGAT GGGCAAGGGA GCCGGCTTCT ATCTGGATGC AACGGAGAAG CCCTGGGCCG AGCACTATCG GATGTACAGC TACGTCACCG AGGAACTCCC GGCCCTGGTC GGCCAGCATT TCCGCGCGGA TATGAGCCGC CAGGGGATTT TTGGGCACTC GATGGGCGGA CACGGCGCGA TGACGATCGC CCTGAAAAAC CCCGAGCGCT TCAGAAGTTG CTCCGCCTTT GCGCCGATCG TCGCCCCTTC TTCCGCCGAT TGGTCGGTCG GTGCCTTTGA AAAATACCTC GGCTCCGACA TGGCGCCCTG GCGCAGGTAC GACGCCTGTG CCCTCGTCGA GGACGGCGCC CGCTTCCCGG AATTCCTAAT CGATCAGGGC AAGGCGGACA ACTTCCTCGA GAACGGTCTG CGCCCATGGC TGTTCGAAGA AGCGGTGAAA GGAACCGGAA TCGGCCTGAC GCTCCGGATG CAGGAGCGCT ACGATCATTC CTATTACTTC ATCTCGACCT TCATGGACGA CCATCTGAGG TGGCACGCAG AAAGGCTCGG CTGA
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Protein sequence | MKVISQNTAF GGMQGVFAHD SDACKGEMTF AVFVPPQAIV EPRPVLWYLS GLTCTHANVM EKGEYRRMAA ELGLIVVCPD TSPRGADVPD DLTNWQMGKG AGFYLDATEK PWAEHYRMYS YVTEELPALV GQHFRADMSR QGIFGHSMGG HGAMTIALKN PERFRSCSAF APIVAPSSAD WSVGAFEKYL GSDMAPWRRY DACALVEDGA RFPEFLIDQG KADNFLENGL RPWLFEEAVK GTGIGLTLRM QERYDHSYYF ISTFMDDHLR WHAERLG
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