Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0972 |
Symbol | secE |
ID | 5321817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1050192 |
End bp | 1050392 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640789914 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_001326660 |
Protein GI | 150396193 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00836456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATCCA AAACGAATCC ATTTACGTTT CTGCAGCAAG TGCGCTCCGA AACGTCTAAA GTGACTTGGC CTTCACGGCG TGAGACGACG ATCTCGACGC TGATGGTTTT CGTCATGGTC TCTTTTGCCG CCGCCTTTTT CTTTGGTGCG GACCAGTTGC TGGGTTGGGT GATGAGCCTG ATCCTCAACG TTGGCGCTTG A
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Protein sequence | MASKTNPFTF LQQVRSETSK VTWPSRRETT ISTLMVFVMV SFAAAFFFGA DQLLGWVMSL ILNVGA
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