Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0963 |
Symbol | ppnK |
ID | 5321804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1040919 |
End bp | 1041692 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640789901 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_001326651 |
Protein GI | 150396184 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.127918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00623774 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCGCA AGTTCAACTC ACTCGCCTTC ATCGCATCAC CGGCAGAGGA AGCGCAGAAG GCGGCCGAGG ATCTCCGGGC GATCTATGGA GATCACGATG CGGAAAAGGC CGATGTGATC GTCGCGCTCG GCGGCGACGG ATTCATGCTG CACACGCTGC ACAAAACGAT GAACACAGGC AAGCTCGTAT ACGGCATGAA CCGCGGCTCG GTCGGGTTCC TGATGAATCG CTACAGCACC GACAACCTGC ATCAGCGCAT CTCCAATGCG GACGAGAACG CATTTCATCC CCTCGAGATG CGCACCACGG ACGTTTCCGG CGAGAAATTC ACGGCGCTTG CGATCAACGA AGTTTACCTG TTCCGCCAAT CGTACCAGGC CGCAAAGCTG AAGGTCATTG TCGACGGCAA GACGCGCCTT GACGAATTGA CTTGTGACGG ACTGCTTCTC GCGACCCCTG CCGGCTCCAC GGCCTATAAC CTTTCCGCGC ATGGACCGAT CCTGCCGCTG GAAGCGCCGC TTCTCGCGCT GACGCCGGTC AGTCCCTTCC GGCCGCGCCG CTGGCGCGGT GCGCTATTGC CCAATCATGT CACTGTGGAC ATCGAAATTC TGGAAGCCGA CAAGCGCCCG GTCAACGCCG TCGCAGATCA CCAGGAGGTC AAGTCCGTCG TCAACGTGCG CATCGCCGAA TCCGAGAAGC TTACTGCGCG CATCCTTTCG GATCCGGACC ATTCCTGGTC CGATCGCATC CTGGCCGAGC AGTTTTCCAA TTGA
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Protein sequence | MARKFNSLAF IASPAEEAQK AAEDLRAIYG DHDAEKADVI VALGGDGFML HTLHKTMNTG KLVYGMNRGS VGFLMNRYST DNLHQRISNA DENAFHPLEM RTTDVSGEKF TALAINEVYL FRQSYQAAKL KVIVDGKTRL DELTCDGLLL ATPAGSTAYN LSAHGPILPL EAPLLALTPV SPFRPRRWRG ALLPNHVTVD IEILEADKRP VNAVADHQEV KSVVNVRIAE SEKLTARILS DPDHSWSDRI LAEQFSN
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