Gene Smed_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0963 
SymbolppnK 
ID5321804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1040919 
End bp1041692 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID640789901 
Productinorganic polyphosphate/ATP-NAD kinase 
Protein accessionYP_001326651 
Protein GI150396184 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.127918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00623774 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGCA AGTTCAACTC ACTCGCCTTC ATCGCATCAC CGGCAGAGGA AGCGCAGAAG 
GCGGCCGAGG ATCTCCGGGC GATCTATGGA GATCACGATG CGGAAAAGGC CGATGTGATC
GTCGCGCTCG GCGGCGACGG ATTCATGCTG CACACGCTGC ACAAAACGAT GAACACAGGC
AAGCTCGTAT ACGGCATGAA CCGCGGCTCG GTCGGGTTCC TGATGAATCG CTACAGCACC
GACAACCTGC ATCAGCGCAT CTCCAATGCG GACGAGAACG CATTTCATCC CCTCGAGATG
CGCACCACGG ACGTTTCCGG CGAGAAATTC ACGGCGCTTG CGATCAACGA AGTTTACCTG
TTCCGCCAAT CGTACCAGGC CGCAAAGCTG AAGGTCATTG TCGACGGCAA GACGCGCCTT
GACGAATTGA CTTGTGACGG ACTGCTTCTC GCGACCCCTG CCGGCTCCAC GGCCTATAAC
CTTTCCGCGC ATGGACCGAT CCTGCCGCTG GAAGCGCCGC TTCTCGCGCT GACGCCGGTC
AGTCCCTTCC GGCCGCGCCG CTGGCGCGGT GCGCTATTGC CCAATCATGT CACTGTGGAC
ATCGAAATTC TGGAAGCCGA CAAGCGCCCG GTCAACGCCG TCGCAGATCA CCAGGAGGTC
AAGTCCGTCG TCAACGTGCG CATCGCCGAA TCCGAGAAGC TTACTGCGCG CATCCTTTCG
GATCCGGACC ATTCCTGGTC CGATCGCATC CTGGCCGAGC AGTTTTCCAA TTGA
 
Protein sequence
MARKFNSLAF IASPAEEAQK AAEDLRAIYG DHDAEKADVI VALGGDGFML HTLHKTMNTG 
KLVYGMNRGS VGFLMNRYST DNLHQRISNA DENAFHPLEM RTTDVSGEKF TALAINEVYL
FRQSYQAAKL KVIVDGKTRL DELTCDGLLL ATPAGSTAYN LSAHGPILPL EAPLLALTPV
SPFRPRRWRG ALLPNHVTVD IEILEADKRP VNAVADHQEV KSVVNVRIAE SEKLTARILS
DPDHSWSDRI LAEQFSN