Gene Smed_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0929 
Symbol 
ID5321770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1004317 
End bp1005033 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content63% 
IMG OID640789869 
ProductNUDIX hydrolase 
Protein accessionYP_001326619 
Protein GI150396152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.89516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGG AGCCGCTCGG CGCCCGCGCT CGCTCGCTGC CGGCCGACGC GGGCAGCTCT 
CCGACGGTCA GGACACGCGA CGCAGCGTCC ATCATGCTCC TCGACCGATC GGGCAAGGAC
GTTCGCGTGC TGATGGGCAA GCGCCACAGC GCCCACGTCT TCATGCCGGA TCTTTACGTC
TTCCCCGGCG GGCGCCGCGA TCCCGGCGAC CATGGTCTGG GATTTTCCGG AGATCTGCAC
CCGGCGGTCC TAAGGTCGCT CAGGTCAGGC GAAGGGCGGA CGATAACGGA GACGCGCGCA
CGGGCGTTAG CGCTGGCGGC CGCGAGGGAA CTCTACGAAG AAGCGGGCGT CGCCCTGGGC
CGGGCGCACG AACGCCCAGG CGCGGCGCTC CCGTTTCTTC CCGATCTTAC AAACTTGCGC
TATATGGCTC GTGCCATTAC TCCTCCGGGC CTGCCGAGGC GATTTGACAC GCGTTTCTTT
GCCGTTTTCA CGGAAGAAGC CGGGATAGAT CCCTCTCGGG TGCTGGAAAG CCAGGAGCTT
CAGGATTTGC AGTGGATCGA TGTCAATGAC TTTTCCTCGC TCCGCGTGCC GGAGATCACC
GCAATCATTC TCTCTGATCT GAGAAACGGT CTAGAATCGG ACCCGTCGCT TCCTCCTGAA
AGAACGGTTC CATTTTATTT TACGCGCCAC GGGCGCTTTC ACCGTACGCT TCTCTGA
 
Protein sequence
MTVEPLGARA RSLPADAGSS PTVRTRDAAS IMLLDRSGKD VRVLMGKRHS AHVFMPDLYV 
FPGGRRDPGD HGLGFSGDLH PAVLRSLRSG EGRTITETRA RALALAAARE LYEEAGVALG
RAHERPGAAL PFLPDLTNLR YMARAITPPG LPRRFDTRFF AVFTEEAGID PSRVLESQEL
QDLQWIDVND FSSLRVPEIT AIILSDLRNG LESDPSLPPE RTVPFYFTRH GRFHRTLL