Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0929 |
Symbol | |
ID | 5321770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1004317 |
End bp | 1005033 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640789869 |
Product | NUDIX hydrolase |
Protein accession | YP_001326619 |
Protein GI | 150396152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.89516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTGG AGCCGCTCGG CGCCCGCGCT CGCTCGCTGC CGGCCGACGC GGGCAGCTCT CCGACGGTCA GGACACGCGA CGCAGCGTCC ATCATGCTCC TCGACCGATC GGGCAAGGAC GTTCGCGTGC TGATGGGCAA GCGCCACAGC GCCCACGTCT TCATGCCGGA TCTTTACGTC TTCCCCGGCG GGCGCCGCGA TCCCGGCGAC CATGGTCTGG GATTTTCCGG AGATCTGCAC CCGGCGGTCC TAAGGTCGCT CAGGTCAGGC GAAGGGCGGA CGATAACGGA GACGCGCGCA CGGGCGTTAG CGCTGGCGGC CGCGAGGGAA CTCTACGAAG AAGCGGGCGT CGCCCTGGGC CGGGCGCACG AACGCCCAGG CGCGGCGCTC CCGTTTCTTC CCGATCTTAC AAACTTGCGC TATATGGCTC GTGCCATTAC TCCTCCGGGC CTGCCGAGGC GATTTGACAC GCGTTTCTTT GCCGTTTTCA CGGAAGAAGC CGGGATAGAT CCCTCTCGGG TGCTGGAAAG CCAGGAGCTT CAGGATTTGC AGTGGATCGA TGTCAATGAC TTTTCCTCGC TCCGCGTGCC GGAGATCACC GCAATCATTC TCTCTGATCT GAGAAACGGT CTAGAATCGG ACCCGTCGCT TCCTCCTGAA AGAACGGTTC CATTTTATTT TACGCGCCAC GGGCGCTTTC ACCGTACGCT TCTCTGA
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Protein sequence | MTVEPLGARA RSLPADAGSS PTVRTRDAAS IMLLDRSGKD VRVLMGKRHS AHVFMPDLYV FPGGRRDPGD HGLGFSGDLH PAVLRSLRSG EGRTITETRA RALALAAARE LYEEAGVALG RAHERPGAAL PFLPDLTNLR YMARAITPPG LPRRFDTRFF AVFTEEAGID PSRVLESQEL QDLQWIDVND FSSLRVPEIT AIILSDLRNG LESDPSLPPE RTVPFYFTRH GRFHRTLL
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