| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0928 |
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| Symbol | |
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| ID | 5321769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1003121 |
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| End bp | 1004305 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789868 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001326618 |
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| Protein GI | 150396151 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.569755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC CGCCGCCCGG TACCTCAGGA CCGGTTGACG AGATCCACTG GCCTTCATTG
ATCGCGGCGC TCGCGTCGAT CACTGCCGTT GGCATTGCCA TCGGCCTGGG GCTCCCGCTG
CTCAGCGTCA TCATGGAGAA ACGCGGCATC GCGCCCACGC TGAACGGGTT GAATGCCGCA
ATGGCCGGTC TCGCATCCAT GGCCGCCGCT CCATTCACGA TGAAATTCGC CCACCGTCAC
GGCGTCGCCC CGACCATGCT GCTGGCAATC GCGTTTGCGG CGACGAGTTC GCTCGGCTTC
TATTATCTCA CGAATTTCTG GCTCTGGTTT CCTCTGCGCA TCGTCTTCCA CGGCGCGATC
ACCGTTCTCT TCATTCTTTC CGAATTCTGG ATCAACGCAA CCGCGCCGCC CAATAGGCGC
GGCTTCGTGC TCGGCGTCTA CGGCACCGTG CTGTCGCTCG GTTTCGCAAG CGGTCCCCTG
CTCTTCTCGA TACTGGGCAG CGAAGGCTTA CTGCCCTTCG CCGTCGGTGC GGGCGTCATC
CTGCTTTCCG CGATCCCGAT CTTCCTCGCG CGCAACGAGA GCCCGGTGCT CGACGAAAAG
CCGAAACGCC ATTTCATGCG TTACGTCTTT CTCGTGCCGA CCGCCACGGC AGCCGTCTTC
ATCTTCGGCG CCGTGGAATA TGGCGGGCTT TCCCTCTTTC CGATCTTCGG TACACGCGCG
GGCTTCAGCG AATCGCAGGC AGCGCTGCTG CTGACCGTCA TGGGCATCGG CAATTTCATA
TTCCAGATTC CGCTCGGCAT GCTTTCCGAC CGCGTGAAAG ACCGCCGCAC GATTCTGTCG
GCACTGACCC TGATCGGCCT CGTCGGCGCC CTGTTCCTGC CGATGCTGGT GGAGAACTGG
ATATTGATGG CGCTGGTGCT TCTGTTCTGG GGTGGATGCG TTTCCGGTCT CTACACGGTC
GGCCTCAGCC ATCTCGGCTC ACGGCTTCAG GGAGCCGACC TCGCTGCCGC CAACGCGGCC
TTCGTGTTCT CCTACGCCGT CGGCACGGTG GCGGGTCCGC AGGTGATCGG CGCGGCGATG
GATGTGACCG GCAATGACGG CTTTGCCTGG GCAATCGCAG GCTTCTTCGG GCTTTATGTC
GTACTTTCCC TGGTCCGCAT CGTTTTGAAA CCAAAACGGC CTTGA
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| Protein sequence | MLKPPPGTSG PVDEIHWPSL IAALASITAV GIAIGLGLPL LSVIMEKRGI APTLNGLNAA
MAGLASMAAA PFTMKFAHRH GVAPTMLLAI AFAATSSLGF YYLTNFWLWF PLRIVFHGAI
TVLFILSEFW INATAPPNRR GFVLGVYGTV LSLGFASGPL LFSILGSEGL LPFAVGAGVI
LLSAIPIFLA RNESPVLDEK PKRHFMRYVF LVPTATAAVF IFGAVEYGGL SLFPIFGTRA
GFSESQAALL LTVMGIGNFI FQIPLGMLSD RVKDRRTILS ALTLIGLVGA LFLPMLVENW
ILMALVLLFW GGCVSGLYTV GLSHLGSRLQ GADLAAANAA FVFSYAVGTV AGPQVIGAAM
DVTGNDGFAW AIAGFFGLYV VLSLVRIVLK PKRP
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