Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0863 |
Symbol | |
ID | 5321701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 921895 |
End bp | 922338 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789800 |
Product | thioesterase superfamily protein |
Protein accession | YP_001326553 |
Protein GI | 150396086 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.317562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.15789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC AACCGGTCAT GACCGTCGAG GAGCTCAATC GCTTTCTCGA TACCGATTTC CCGCAGGTCC ACACGGATGG AAAGGTCTTT GCAGTGACGG ATACCGGACC GGGCTTCGCC ACGATGCGGC TCGACCCGAA CGAGCGCCAT ATTCGTCCGG GCGGCACGGT TTCGGGCCCG ACGCTGTTCG CGCTGGCGGA CGTGTCGGCC TATATTGCGC TCATCGCGCA TATCGGCCCG GTCGCGCTTG CCGTGACCAC CAGCCTCAAC ATCAACTTCC TGCGCAAGCC GGAACCCGAA CCCCTCGAAT GTACCTGCCG GATTCTCAAG CTCGGGAAGC GCCTCGCCGT ACTCGATGCC TCGATAAAGC CGGTCGCAGG CCCGGATCTG GTCGCTCATG CGACCGCCAC CTATTCAATT CCACCGCGCC GAGATGCGGT ATAA
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Protein sequence | MTLQPVMTVE ELNRFLDTDF PQVHTDGKVF AVTDTGPGFA TMRLDPNERH IRPGGTVSGP TLFALADVSA YIALIAHIGP VALAVTTSLN INFLRKPEPE PLECTCRILK LGKRLAVLDA SIKPVAGPDL VAHATATYSI PPRRDAV
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