Gene Smed_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0863 
Symbol 
ID5321701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp921895 
End bp922338 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID640789800 
Productthioesterase superfamily protein 
Protein accessionYP_001326553 
Protein GI150396086 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.317562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.15789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC AACCGGTCAT GACCGTCGAG GAGCTCAATC GCTTTCTCGA TACCGATTTC 
CCGCAGGTCC ACACGGATGG AAAGGTCTTT GCAGTGACGG ATACCGGACC GGGCTTCGCC
ACGATGCGGC TCGACCCGAA CGAGCGCCAT ATTCGTCCGG GCGGCACGGT TTCGGGCCCG
ACGCTGTTCG CGCTGGCGGA CGTGTCGGCC TATATTGCGC TCATCGCGCA TATCGGCCCG
GTCGCGCTTG CCGTGACCAC CAGCCTCAAC ATCAACTTCC TGCGCAAGCC GGAACCCGAA
CCCCTCGAAT GTACCTGCCG GATTCTCAAG CTCGGGAAGC GCCTCGCCGT ACTCGATGCC
TCGATAAAGC CGGTCGCAGG CCCGGATCTG GTCGCTCATG CGACCGCCAC CTATTCAATT
CCACCGCGCC GAGATGCGGT ATAA
 
Protein sequence
MTLQPVMTVE ELNRFLDTDF PQVHTDGKVF AVTDTGPGFA TMRLDPNERH IRPGGTVSGP 
TLFALADVSA YIALIAHIGP VALAVTTSLN INFLRKPEPE PLECTCRILK LGKRLAVLDA
SIKPVAGPDL VAHATATYSI PPRRDAV