Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0856 |
Symbol | |
ID | 5321694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 916281 |
End bp | 917021 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789793 |
Product | metallophosphoesterase |
Protein accession | YP_001326546 |
Protein GI | 150396079 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0272546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.338998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAG CCGTCAGTTC CGATATTCAC GGCAACGATC TCGCGCTGGA GGCCGTGCTC GCCGACGTCG ATGCGCAAGG AATCGACGAA ATCGTCAATC TTGGCGATCA CGTGAGCGGT CCGCTGAATG CTGCCCGGAC GGCTGAGATC CTGATCGGCC GCAATACTGC TGCAATACGC GGCAATCACG ATCGCTACCT CCTGACGATC GATCCTTCCC GCATGGGATT GTCCGACCGT GCCGCCCATG GCGAACTCGA TCGGCGACAT CTTGACTGGT TAGCCGCCCT GCCGGACACC CTTGTCCATA GGGATGTACT CTTTCTCTGC CATGGCACGC CGGCAAGCGA CGAGGCCTAT TGGATGGAAA CGCTGACGGA GGATGGTGTC GTTCACATAG CTCAACGAGC GGCGATCGAG CGTATGGCAG AAGACATCCT CTACCCGGTG ATCCTCTGCG GCCACACGCA TGTCCCCCGC GCGTTGCGGC TTTCGGACGG GCGCCTGCTG GTCAATCCGC GTAGTGTCGG CTGCCCCGCC TATGCTGACG ACCAGCCGGT TGCACACAAA GTCGAAGCCG GCTCTCCACA TGCCCGATAC GCTGTCGTCG AACGGACATC CGGCGATTGG AACGTCACTT TCCGCTGCGT AGCCTACGAT CACATGGCCG CTTCTCTTCT CGCGGCCGAA CGCAACCGCC CGGAATGGGC AAGGGCGCTT GCGACCGGGT TCGTCGATTG A
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Protein sequence | MRIAVSSDIH GNDLALEAVL ADVDAQGIDE IVNLGDHVSG PLNAARTAEI LIGRNTAAIR GNHDRYLLTI DPSRMGLSDR AAHGELDRRH LDWLAALPDT LVHRDVLFLC HGTPASDEAY WMETLTEDGV VHIAQRAAIE RMAEDILYPV ILCGHTHVPR ALRLSDGRLL VNPRSVGCPA YADDQPVAHK VEAGSPHARY AVVERTSGDW NVTFRCVAYD HMAASLLAAE RNRPEWARAL ATGFVD
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