Gene Smed_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0856 
Symbol 
ID5321694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp916281 
End bp917021 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID640789793 
Productmetallophosphoesterase 
Protein accessionYP_001326546 
Protein GI150396079 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0272546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.338998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAG CCGTCAGTTC CGATATTCAC GGCAACGATC TCGCGCTGGA GGCCGTGCTC 
GCCGACGTCG ATGCGCAAGG AATCGACGAA ATCGTCAATC TTGGCGATCA CGTGAGCGGT
CCGCTGAATG CTGCCCGGAC GGCTGAGATC CTGATCGGCC GCAATACTGC TGCAATACGC
GGCAATCACG ATCGCTACCT CCTGACGATC GATCCTTCCC GCATGGGATT GTCCGACCGT
GCCGCCCATG GCGAACTCGA TCGGCGACAT CTTGACTGGT TAGCCGCCCT GCCGGACACC
CTTGTCCATA GGGATGTACT CTTTCTCTGC CATGGCACGC CGGCAAGCGA CGAGGCCTAT
TGGATGGAAA CGCTGACGGA GGATGGTGTC GTTCACATAG CTCAACGAGC GGCGATCGAG
CGTATGGCAG AAGACATCCT CTACCCGGTG ATCCTCTGCG GCCACACGCA TGTCCCCCGC
GCGTTGCGGC TTTCGGACGG GCGCCTGCTG GTCAATCCGC GTAGTGTCGG CTGCCCCGCC
TATGCTGACG ACCAGCCGGT TGCACACAAA GTCGAAGCCG GCTCTCCACA TGCCCGATAC
GCTGTCGTCG AACGGACATC CGGCGATTGG AACGTCACTT TCCGCTGCGT AGCCTACGAT
CACATGGCCG CTTCTCTTCT CGCGGCCGAA CGCAACCGCC CGGAATGGGC AAGGGCGCTT
GCGACCGGGT TCGTCGATTG A
 
Protein sequence
MRIAVSSDIH GNDLALEAVL ADVDAQGIDE IVNLGDHVSG PLNAARTAEI LIGRNTAAIR 
GNHDRYLLTI DPSRMGLSDR AAHGELDRRH LDWLAALPDT LVHRDVLFLC HGTPASDEAY
WMETLTEDGV VHIAQRAAIE RMAEDILYPV ILCGHTHVPR ALRLSDGRLL VNPRSVGCPA
YADDQPVAHK VEAGSPHARY AVVERTSGDW NVTFRCVAYD HMAASLLAAE RNRPEWARAL
ATGFVD