Gene Smed_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0842 
Symbol 
ID5321680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp900347 
End bp901519 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID640789780 
Productaldo/keto reductase 
Protein accessionYP_001326533 
Protein GI150396066 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.495708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0681518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC GACCTGGAAA CGACGTTTCC GCGCGTTACG CTACAATGAC CAATCGTCGC 
ACATTGCTTG GCGCCGGTCT CGGCCTCGCA GCAGCGTCTC TTGTGAGCAC CACTAGCGCC
AGTGCGCAGT CCGAAACCAG CAACCGTTCA GACGCCACCC CCATCACCCT GCAGCAGGGG
AAATCAATGG GCGTTCGCAA ACTCGGCTCA TTGGAAGTTT CTGCCATCGG TCTCGGATGC
CTCGACATGG TCGGTTATTA TGGCGGCGGC CCACGAGACC GTAAGTCCAT GGTCTCGCTG
ATACGCGCGG CCTTCGAGCA AGGTGTGACA TTCTTCGACA CCGCAGAGGT CTACGGGCCT
TACATCAGCG AGGAATATGT CGCCGAGGCG CTCGCGCCGG TGCGCGATCA GGTCGTCATC
GCCACGAAAT TCGGCTTTGG TGTCGAGGAG GGCCAGCCGA CGGCGCTGAA CAGCCAGCCC
GATCATCTGC GCCGGGCGGT CGACGGCTCC CTCAAGCGTC TGAAGACTGA CCATATCGAT
CTTCTGTATC AGCATCGTCC CGACCCGAAT GTGCCGATCG AAGACGTCGC GGAGGCTGTC
AAAGACCTGA TTCAGGCCGG AAAGGTCAAG CATTGGGGGC TTTCCGAGGC CAGCGCGGGC
ACCATCCGCC GGGCTCACGC CGTTCACCCA GTCTCCGCGG TGCAAAGCGA ATATGCGATG
TGGTGGCGCG AACCCGAGAC GCGGATCTTC CCGACGCTGG AGGAACTCGG AATCGGCTTT
GTGCCCTATT GCCCACTCGG GCGGAGTTTT CTTGCGGGCG CGGTCAACCC CAGCCAGCGT
TTTGAGCGAA CCGATCGCCG GCACAACCTG CCGCGCTTCA CGCCCGAGGC GCTGGCCGCC
AACATGGCCC TGTTCGACTA TGTCCGCGAC TGGGCACAGC GCAAAAAAAC GACGCCTGCG
CAGTTTGCGT TAGCATGGAT CCTGGCGCAG CGGCCGTGGA TCGCCCCGAT TCCGGGCACA
ACCCAGTACC CGCATCTTGC GGAAAACCTC GGCGCGACGG GTGTCCAACT GACGGCTGAC
GAACTTCGCG AGATCGACGC CGGGCTCGCT CGCATCAAGC TGCAAGGTGG TCGGGCCGAT
CCCTTCACCG AGAGCCAGTT CGACTACAGC TAA
 
Protein sequence
MTDRPGNDVS ARYATMTNRR TLLGAGLGLA AASLVSTTSA SAQSETSNRS DATPITLQQG 
KSMGVRKLGS LEVSAIGLGC LDMVGYYGGG PRDRKSMVSL IRAAFEQGVT FFDTAEVYGP
YISEEYVAEA LAPVRDQVVI ATKFGFGVEE GQPTALNSQP DHLRRAVDGS LKRLKTDHID
LLYQHRPDPN VPIEDVAEAV KDLIQAGKVK HWGLSEASAG TIRRAHAVHP VSAVQSEYAM
WWREPETRIF PTLEELGIGF VPYCPLGRSF LAGAVNPSQR FERTDRRHNL PRFTPEALAA
NMALFDYVRD WAQRKKTTPA QFALAWILAQ RPWIAPIPGT TQYPHLAENL GATGVQLTAD
ELREIDAGLA RIKLQGGRAD PFTESQFDYS