Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0842 |
Symbol | |
ID | 5321680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 900347 |
End bp | 901519 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640789780 |
Product | aldo/keto reductase |
Protein accession | YP_001326533 |
Protein GI | 150396066 |
COG category | [C] Energy production and conversion |
COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.495708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0681518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC GACCTGGAAA CGACGTTTCC GCGCGTTACG CTACAATGAC CAATCGTCGC ACATTGCTTG GCGCCGGTCT CGGCCTCGCA GCAGCGTCTC TTGTGAGCAC CACTAGCGCC AGTGCGCAGT CCGAAACCAG CAACCGTTCA GACGCCACCC CCATCACCCT GCAGCAGGGG AAATCAATGG GCGTTCGCAA ACTCGGCTCA TTGGAAGTTT CTGCCATCGG TCTCGGATGC CTCGACATGG TCGGTTATTA TGGCGGCGGC CCACGAGACC GTAAGTCCAT GGTCTCGCTG ATACGCGCGG CCTTCGAGCA AGGTGTGACA TTCTTCGACA CCGCAGAGGT CTACGGGCCT TACATCAGCG AGGAATATGT CGCCGAGGCG CTCGCGCCGG TGCGCGATCA GGTCGTCATC GCCACGAAAT TCGGCTTTGG TGTCGAGGAG GGCCAGCCGA CGGCGCTGAA CAGCCAGCCC GATCATCTGC GCCGGGCGGT CGACGGCTCC CTCAAGCGTC TGAAGACTGA CCATATCGAT CTTCTGTATC AGCATCGTCC CGACCCGAAT GTGCCGATCG AAGACGTCGC GGAGGCTGTC AAAGACCTGA TTCAGGCCGG AAAGGTCAAG CATTGGGGGC TTTCCGAGGC CAGCGCGGGC ACCATCCGCC GGGCTCACGC CGTTCACCCA GTCTCCGCGG TGCAAAGCGA ATATGCGATG TGGTGGCGCG AACCCGAGAC GCGGATCTTC CCGACGCTGG AGGAACTCGG AATCGGCTTT GTGCCCTATT GCCCACTCGG GCGGAGTTTT CTTGCGGGCG CGGTCAACCC CAGCCAGCGT TTTGAGCGAA CCGATCGCCG GCACAACCTG CCGCGCTTCA CGCCCGAGGC GCTGGCCGCC AACATGGCCC TGTTCGACTA TGTCCGCGAC TGGGCACAGC GCAAAAAAAC GACGCCTGCG CAGTTTGCGT TAGCATGGAT CCTGGCGCAG CGGCCGTGGA TCGCCCCGAT TCCGGGCACA ACCCAGTACC CGCATCTTGC GGAAAACCTC GGCGCGACGG GTGTCCAACT GACGGCTGAC GAACTTCGCG AGATCGACGC CGGGCTCGCT CGCATCAAGC TGCAAGGTGG TCGGGCCGAT CCCTTCACCG AGAGCCAGTT CGACTACAGC TAA
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Protein sequence | MTDRPGNDVS ARYATMTNRR TLLGAGLGLA AASLVSTTSA SAQSETSNRS DATPITLQQG KSMGVRKLGS LEVSAIGLGC LDMVGYYGGG PRDRKSMVSL IRAAFEQGVT FFDTAEVYGP YISEEYVAEA LAPVRDQVVI ATKFGFGVEE GQPTALNSQP DHLRRAVDGS LKRLKTDHID LLYQHRPDPN VPIEDVAEAV KDLIQAGKVK HWGLSEASAG TIRRAHAVHP VSAVQSEYAM WWREPETRIF PTLEELGIGF VPYCPLGRSF LAGAVNPSQR FERTDRRHNL PRFTPEALAA NMALFDYVRD WAQRKKTTPA QFALAWILAQ RPWIAPIPGT TQYPHLAENL GATGVQLTAD ELREIDAGLA RIKLQGGRAD PFTESQFDYS
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