Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0814 |
Symbol | |
ID | 5321651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 877110 |
End bp | 877622 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640789751 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001326505 |
Protein GI | 150396038 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.304644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA AGATGAAGCC GCAGTTTGTT GCCCCCAGAG ACCCGCAGGA AGACACGATC CGTGGTCTCT ACATGGAATC CCTCCACCTC GTCGAGCGTC TGCATCGCCG CCTGCTCGAC GTCATCAAGG ATGAGTTCGA CCGTCAGGGT CGCAGCGACG TCAATGCCGT TCAGGCACTC CTGCTGTTCA ATATCGGGAA TTCCGAACTG ACCGCCGGCG AACTTCGCTC CCGCGGCTAC TATCTCGGCT CCAACGTTTC CTACAACGTC AAGAAACTGG TCGATCTCGG CCTGATCAAC CACCAGCGCT CCCGCGTCGA CCGCCGTTCG GTTCGCATCA GCCTTACGGA AGATGGGCAG GAGATCGCGG AAACGGTCGC CAAACTCTAT GAGCGCCATA TCGGCTCGAT CCAGAAGGTT GGCGGCATCG GCAGCGATGA GTTCACCCAG ATGAACAAGC TCCTGCAGCG TCTCGACCGC TTCTGGAACG ACCAGATTCT GTATCGCCTC TAA
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Protein sequence | MNTKMKPQFV APRDPQEDTI RGLYMESLHL VERLHRRLLD VIKDEFDRQG RSDVNAVQAL LLFNIGNSEL TAGELRSRGY YLGSNVSYNV KKLVDLGLIN HQRSRVDRRS VRISLTEDGQ EIAETVAKLY ERHIGSIQKV GGIGSDEFTQ MNKLLQRLDR FWNDQILYRL
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