Gene Smed_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0768 
Symbol 
ID5321605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp825863 
End bp826789 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID640789705 
Productgalactose 1-dehydrogenase 
Protein accessionYP_001326459 
Protein GI150395992 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0771142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TCCAAATTGC CATTGTCGGC GTCGGCAAGA TTGTGCGCGA CCAACATCTG 
CCGGCCCTCG CGAAGAACGC GGACTACCGG CTGATCGCAG CCGCGAGCCG CCACGGAACT
GTGGACGGAA TCGAGAATTT CAAATCGATC GAGGCGATGC TCGATGCGGT GCCGGCGATC
GAGGCGGTTT CGCTCTGCAT GCCGCCCCAA TACCGCTATG AGGCGGCCCG TTCCGCGCTT
TCGGCCCGCA AGCACGTCTT CCTGGAAAAG CCACCGGGCG CGACCTTGAG CGAGGTGGCG
GACCTCGAGG CACTGGCGCA GGAAAAGGGC GTCTCGCTCT TTGCAAGCTG GCACTCGCGC
TATGCGCCGG CAGTCGAAGC GGCAAAGACG TTTCTGGCGT CGACGGCGGT TGATAAAGTC
CGCATCATCT GGAAGGAAGA TGTTCGCCAT TGGCATCCCA ACCAGGAATG GATCTGGGCA
GCCGGCGGGC TCGGCGTCTT CGATCCTGGC ATAAATGCAC TCTCGATCAT GACCCATATC
CTGCCCCGCC CGGTCTTCAT CACTTCGGCG ACGCTTGAAT TCCCCGAAAA CCGCGACGCT
CCGATCGCTG CCATGATCGC CTTCAGCGAT GCCGAAAAGC TTGACGTGGC TGCCGAGTTC
GATTGGCGCC AGACCGGCAA GCAGAGCTGG GACATCGTCG CATCAACCGG CGCGGGCGAG
ATGGTGCTTT CCGAGGGCGG CGCCAAACTC GCCATTGACG GCAAGATCGT CCATGAGGAG
CCCGAGCAGG AGTATCCGAT GCTGTATCGG CGTTTTGCCG AGATCATCAA GGCCGGTAGG
TCCGATGTCG ATCTGGCTCC CCTCCGGCAT GTGGCCGACG CCTTCATGCT CGGTCGCCGC
AAATTCGTGG AAGCATTCCA CGATTGA
 
Protein sequence
MSPIQIAIVG VGKIVRDQHL PALAKNADYR LIAAASRHGT VDGIENFKSI EAMLDAVPAI 
EAVSLCMPPQ YRYEAARSAL SARKHVFLEK PPGATLSEVA DLEALAQEKG VSLFASWHSR
YAPAVEAAKT FLASTAVDKV RIIWKEDVRH WHPNQEWIWA AGGLGVFDPG INALSIMTHI
LPRPVFITSA TLEFPENRDA PIAAMIAFSD AEKLDVAAEF DWRQTGKQSW DIVASTGAGE
MVLSEGGAKL AIDGKIVHEE PEQEYPMLYR RFAEIIKAGR SDVDLAPLRH VADAFMLGRR
KFVEAFHD