Gene Smed_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0752 
Symbol 
ID5321589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp807545 
End bp809128 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content63% 
IMG OID640789689 
Producthypothetical protein 
Protein accessionYP_001326443 
Protein GI150395976 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.681409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGA ACAATGCCGA GGTAACCGCA ACGCACTGGA TCGACCAGCA CGCTGCTGCA 
CTGTCGGAAT GGACAAGCGA AATCTGGCAT CGCGGCGAGA CGGCCTGGCG CGAGTACGAA
TCCGCCGCCT GGTATGTGCA GCGCCTGCGT GCCGAAGGTT TCGAGGTGGA GGAAGGCTCG
GGCGGAATGC CAACCGCCTT CGCCGCATGC TGGACGCACG GCAGGGGCGG TCCTGTCATC
GCGACCTATG CCGAGTATGA TGCCGTGCCG GGCAATTGTC AGGCCGCCGG TACCGAAAAA
CAGCCTAGAT CCGGTCTCAA CGAGCACGCC GGCGGCCATA CCGATCCGCA TTCAGCTCTC
GGCACAAGCG CACTCGGCGG CCTGTTGGCC ACAAAGGCAG CAATGCAGGC GCACGATATT
CCCGGCACGC TGAAATTCTT CGGCGAGCCG GCTGAGAAGG TTCGCGGCTC CAAGCCGATC
CATGCGGCCA AGGGTTTCTA TGACGGCCTC GACGCCATGA TTAGTTTCCA TCCCTGCTAT
ATGCTGCCGC TTTGCAATAC CGTGAACTGG GACACCCATT GCGGCGCGGC CTATGCAATG
GTTTACCGGT TTGTCTGCGA CGCGCCCGAG ACCTGGCTGA AGCGGGCCGA TGGAACTCCG
ATCCCGCAGG CGCACAGTGC GGTGCGCGCG CCGGGCGCCA ACGACGCCCT GTTCTACATG
TACAACGCCT CCAAGGCGCT GCGCGATTCG ATGCTGCCGC ATATGGGCGG CTGGTCGATA
AGCGAAGCGA TCCTGACGGC CGGGCAAGCC ACCGCCGATA ATCTGCCCGC CAGGATCGCC
GAGATCCAGT ACATCATCCG CGTACCGACC GTTGAACTTG CCGAGCAGGC GACGTTGATC
CTCGACCGAA ATGCCGATGC CGCTTCGCGG CTTGCGCATT GCCGCGTCGA AAGGATCTGG
GTTTCGAAAT CGCGTCCGGG CCTCGCCAAC CATGTGATGG CCGATCTCGT ATATGACAAG
CTTGCTGCCG TCGGGGCCCC TAAATGGGGT GAGAAAGCCA AGGCGATTGC TCGGGAAATA
CAATCCAACC TAGGCCTGCA GCCCATGGCG GAGCCGTTCC TGCTCGATTG CGAGACGCTG
ATCGCCCCGC AGGAAGCCGA GCGCATTCTC AGACGGGACC TGCCGCCGTC GCAGGTCAAC
TACACGTCGG ACGACTACAC CGACATGTGC TGGCATACGC CGACAGCGCG CCTCTACATC
GCCCGGCCGA TGCTGAACGG CCCTGCCGGA TTCGCTTATC CCGACTGGGT GTTGAATGCT
CTGGGCGGCA TACCCGAGAC GATCGATCCG ATGGTCATCT GCGCATCGAA GACGATCGCT
CATTCCATGC TGGAACTCCT GCAGAACGCC GAGGCACGCG CAGCAGCGAT GAAGGAATTC
GAGGAGCGAA CCGGTGGCGG TGTGGGCGGC ACGAAATGGA TCCCGCCCCT CGCCGACTAC
GAGGCTCCTA TCGGCCTGCG CTGGCCGGAA TATGTCACCA CCGTGCGCGG CCGCGAATGG
TGGATCCCGA CCGCCGGCTA TTGA
 
Protein sequence
MVKNNAEVTA THWIDQHAAA LSEWTSEIWH RGETAWREYE SAAWYVQRLR AEGFEVEEGS 
GGMPTAFAAC WTHGRGGPVI ATYAEYDAVP GNCQAAGTEK QPRSGLNEHA GGHTDPHSAL
GTSALGGLLA TKAAMQAHDI PGTLKFFGEP AEKVRGSKPI HAAKGFYDGL DAMISFHPCY
MLPLCNTVNW DTHCGAAYAM VYRFVCDAPE TWLKRADGTP IPQAHSAVRA PGANDALFYM
YNASKALRDS MLPHMGGWSI SEAILTAGQA TADNLPARIA EIQYIIRVPT VELAEQATLI
LDRNADAASR LAHCRVERIW VSKSRPGLAN HVMADLVYDK LAAVGAPKWG EKAKAIAREI
QSNLGLQPMA EPFLLDCETL IAPQEAERIL RRDLPPSQVN YTSDDYTDMC WHTPTARLYI
ARPMLNGPAG FAYPDWVLNA LGGIPETIDP MVICASKTIA HSMLELLQNA EARAAAMKEF
EERTGGGVGG TKWIPPLADY EAPIGLRWPE YVTTVRGREW WIPTAGY