| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0710 |
|---|
| Symbol | |
|---|
| ID | 5321547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 763580 |
|---|
| End bp | 764044 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640789647 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001326401 |
|---|
| Protein GI | 150395934 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00586] mutator mutT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.409696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAG AACAACCCCA GCGCGCCTCC TCCGCCATTC TCGAGCGGAA CGGCCGCTAC
CTTCTTGTCC GGCGCGCCAA TCCGCCCTCG GCGGACATGT ACGCTTTCCC CGGAGGCCGG
GCGGAGCCCG GGGAGACGCC TGCGGAGACG GCATTGCGAG AGCTCGCCGA GGAGACCGGC
ATCGAGGCCC GAAATCCCGT GCTCTTCGAA GCCTACGACC TGCCGGGAAA AGGGCCCGAG
GAGCGTCACT TCCTGCTCTC GGTCTTCACC GTCGAAGCTG ATCCCGATTC GGTCGCGGTT
GCCTGCGACG ACGCCGCCGG CCTTGGCTGG TTTACGCGCG AGGAGATCTT CGACTTGCCC
ATCCCGGAAA GCGTGCGCGA TTGCGTGGAA AAGCTGGCAA CCGGCGGACA CAGGGGTAAT
CCCGGGTTCG TAACGGCTAC CGCCTCGGAT TTGAGGGGCT CATGA
|
|---|
| Protein sequence | MMTEQPQRAS SAILERNGRY LLVRRANPPS ADMYAFPGGR AEPGETPAET ALRELAEETG
IEARNPVLFE AYDLPGKGPE ERHFLLSVFT VEADPDSVAV ACDDAAGLGW FTREEIFDLP
IPESVRDCVE KLATGGHRGN PGFVTATASD LRGS
|
|---|
| |