Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0705 |
Symbol | |
ID | 5321542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 760388 |
End bp | 760993 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789642 |
Product | hypothetical protein |
Protein accession | YP_001326396 |
Protein GI | 150395929 |
COG category | [R] General function prediction only |
COG ID | [COG1896] Predicted hydrolases of HD superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.864355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.482202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGCGC GTGCGTGGCA GCGTATGCTT TCCGGGCGGC GGCTCGACCT TCTCGATCCC TCTCCGCTTG ACGTGGAGCT TTCCGATATC GCCCACGGGC TTGCGCGCGT GGCGCGGTGG AACGGGCAGA CGTCCGGCGA CCACGCCTTT TCCGTTGCCC AGCACAGCCT CGTCGTCGAG GAGATCTTCC GCCTTACCAA CCGCTGCGAT GCCCAGGATT GCCTGATGGC GCTGCTTCAT GACGCTCCGG AATATGTCAT TGGCGACATG ATTTCGCCGT TCAAGGCCGT TGTCGGCGGC GGCTACAAGA CGGTGGAGAA GCGCCTGGAA GGTGCCGTTC ACATCCGTTT CGGTCTGCCG GCCCACACGC CCAGGGAGCT CAAGGAGCGG ATCAAGAAGG CCGACCGGGT CGCCGCCTAT TTCGAAGCGA CGGAGCTTGC CGGCTTTTCT GCTGAGGAGG CCCGCAAGTT CTTCGGCCAA CCACGCGGCG TCACCCGCGA GATGTTGCTG ATCGAACCCT TGCCGGCTGT CGAGGCGCAG CGGCTTTTCG CAGCGCGCTT CGTTGCGTTG GAGACCGAGC GCGCCAAAGC GCGGCAGGAG GCGTGA
|
Protein sequence | MNARAWQRML SGRRLDLLDP SPLDVELSDI AHGLARVARW NGQTSGDHAF SVAQHSLVVE EIFRLTNRCD AQDCLMALLH DAPEYVIGDM ISPFKAVVGG GYKTVEKRLE GAVHIRFGLP AHTPRELKER IKKADRVAAY FEATELAGFS AEEARKFFGQ PRGVTREMLL IEPLPAVEAQ RLFAARFVAL ETERAKARQE A
|
| |