Gene Smed_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0705 
Symbol 
ID5321542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp760388 
End bp760993 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID640789642 
Producthypothetical protein 
Protein accessionYP_001326396 
Protein GI150395929 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.864355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.482202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC GTGCGTGGCA GCGTATGCTT TCCGGGCGGC GGCTCGACCT TCTCGATCCC 
TCTCCGCTTG ACGTGGAGCT TTCCGATATC GCCCACGGGC TTGCGCGCGT GGCGCGGTGG
AACGGGCAGA CGTCCGGCGA CCACGCCTTT TCCGTTGCCC AGCACAGCCT CGTCGTCGAG
GAGATCTTCC GCCTTACCAA CCGCTGCGAT GCCCAGGATT GCCTGATGGC GCTGCTTCAT
GACGCTCCGG AATATGTCAT TGGCGACATG ATTTCGCCGT TCAAGGCCGT TGTCGGCGGC
GGCTACAAGA CGGTGGAGAA GCGCCTGGAA GGTGCCGTTC ACATCCGTTT CGGTCTGCCG
GCCCACACGC CCAGGGAGCT CAAGGAGCGG ATCAAGAAGG CCGACCGGGT CGCCGCCTAT
TTCGAAGCGA CGGAGCTTGC CGGCTTTTCT GCTGAGGAGG CCCGCAAGTT CTTCGGCCAA
CCACGCGGCG TCACCCGCGA GATGTTGCTG ATCGAACCCT TGCCGGCTGT CGAGGCGCAG
CGGCTTTTCG CAGCGCGCTT CGTTGCGTTG GAGACCGAGC GCGCCAAAGC GCGGCAGGAG
GCGTGA
 
Protein sequence
MNARAWQRML SGRRLDLLDP SPLDVELSDI AHGLARVARW NGQTSGDHAF SVAQHSLVVE 
EIFRLTNRCD AQDCLMALLH DAPEYVIGDM ISPFKAVVGG GYKTVEKRLE GAVHIRFGLP
AHTPRELKER IKKADRVAAY FEATELAGFS AEEARKFFGQ PRGVTREMLL IEPLPAVEAQ
RLFAARFVAL ETERAKARQE A