Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0704 |
Symbol | |
ID | 5321541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 759849 |
End bp | 760385 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640789641 |
Product | hypothetical protein |
Protein accession | YP_001326395 |
Protein GI | 150395928 |
COG category | [R] General function prediction only |
COG ID | [COG5350] Predicted protein tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.200895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.482202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTA TCGTGGTCTC GCCGCTTCGG CGCATCGCGG AAATGGCCGT GCGGCACGGC TGCCGCGAAA TGTTGAGCCT GCTTGCGAAG GGGCAGGATT TTCATCGCCC TGCCGTCATC GATCAGGCGA AGCATCTGAA GATCGGCGTC AACGACATTA CCTTTGCGGG AACGGGCGGT CTGATCGCCC CCCAGGAAGA ACATGTTCGC GGGATCATCG GCTTCGCCCG TAACTGGGAC CGGACAAGGC CAATGCTCAT CCACTGCTGG ATGGGGGTCT CCCGTTCGCC TGCGGCCGCG CTGATCGCAG CGCTTGCAGT CGAGCCGGAC CAGGACGACC ACGCGCTCGC ACGGCGCCTC CGGCTTGCTT CGCCCTTCGC GACGCCGAAT GCGCGGCTCG TCGAATTCGG CGACGAGGCC TTGTCGCGCA AGGGCCGGCT CGTCGATGCG GTGCGGTCCA TCGGACGCGG CGCCGATGCC GACGGCAATG CACCCTTCAT CCTGCCTCTT GTGGAAGACT TGCAACATGT CGGGTGA
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Protein sequence | MTGIVVSPLR RIAEMAVRHG CREMLSLLAK GQDFHRPAVI DQAKHLKIGV NDITFAGTGG LIAPQEEHVR GIIGFARNWD RTRPMLIHCW MGVSRSPAAA LIAALAVEPD QDDHALARRL RLASPFATPN ARLVEFGDEA LSRKGRLVDA VRSIGRGADA DGNAPFILPL VEDLQHVG
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