| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0699 |
|---|
| Symbol | |
|---|
| ID | 5321536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 754451 |
|---|
| End bp | 755530 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640789636 |
|---|
| Product | quinolinate synthetase |
|---|
| Protein accession | YP_001326390 |
|---|
| Protein GI | 150395923 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0379] Quinolinate synthase |
|---|
| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.363533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.866465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC TTAACCTTCG CAAGGATGCG GCGCCCGCTC CGGCCTTCGT GAGCGCTGCG
GCACGCTTCG GCGTCATCGA AAAACCCGAT CTCGCCTTCA CCCCGGCTGT CGCACGCGAG
ACCGAGCATC TCTACGAGAA GGTCAAGGAC TTCATCCCCG CATTCGAGTG GGCGGCCTAT
GCGCCCTATG TCCATGCGAT CAACCGGCTG AAGAAGGAAC GCAACGCGGT CATCCTCGCT
CACAATTACC AGACGCCGGA TATTTTTCAC TGCGTGGCGG ACATCGTCGG CGATTCGCTC
CAACTCGCGC GCGACGCCAC TAAAGTGGAC GCCGAGATCA TCATTCAGTG CGGCGTGCAC
TTCATGGCCG AGACGTCGAA GCTGCTCAAC CCGGAAAAAA CGGTCCTCAT TCCGGATGCC
AGAGCAGGGT GCTCGCTGTC GGAGTCGATC ACCGGCGCGG ATGTGCGGCT CCTCAAGGAG
CGCTATCCGG GTGTGCCGGT CGTTACCTAT GTCAACACAT CGGCCGATGT GAAGGCGGAG
ACCGACATCT GCTGCACCTC GTCCAACGTG CTGGCAGTGG TTGAAAGTCT GGAATCCGAT
ACCGTGCTCT GCATCCCCGA CGAATATCTG GCGATGAACG TGGCGCGAGA GACGAACAAG
AAGATCCTGA CCTGGAAAGG TCACTGCGAG GTTCACGAGC GTTTCACGGC AGCCGAACTC
CTGGCTTACA AGGAAGCCAA TCCCGGCATC GAGATCGTCG GCCATCCGGA ATGCCACCCC
GACGTCATCG CCGTCTGCGA CTTCTCCGGA TCCACCTCGG GCATGATCAA TTACGTCAAG
GACAAACGGC CTCAACGCGT GCTGCTCGTG ACCGAATGCT CGATGGCATC GAATATTCAG
GCGGAGGTCA AAGGCGTGGA TTTCGTAAAG CCCTGCAATC TGTGTCCGCA CATGAAGCGC
ATCACGCTGC CGAAGATCTT CGACAGCCTG CTCACCATGA CGGAAGAGGT TCTGGTCGAC
CCCGCGATCG CCGACCGCGC GCGGCTCGCA GTCGAGCGCA TGGTGAACCT CAAGCAGTGA
|
|---|
| Protein sequence | MTTLNLRKDA APAPAFVSAA ARFGVIEKPD LAFTPAVARE TEHLYEKVKD FIPAFEWAAY
APYVHAINRL KKERNAVILA HNYQTPDIFH CVADIVGDSL QLARDATKVD AEIIIQCGVH
FMAETSKLLN PEKTVLIPDA RAGCSLSESI TGADVRLLKE RYPGVPVVTY VNTSADVKAE
TDICCTSSNV LAVVESLESD TVLCIPDEYL AMNVARETNK KILTWKGHCE VHERFTAAEL
LAYKEANPGI EIVGHPECHP DVIAVCDFSG STSGMINYVK DKRPQRVLLV TECSMASNIQ
AEVKGVDFVK PCNLCPHMKR ITLPKIFDSL LTMTEEVLVD PAIADRARLA VERMVNLKQ
|
|---|
| |