Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0653 |
Symbol | |
ID | 5321489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 706062 |
End bp | 706463 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789589 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001326344 |
Protein GI | 150395877 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.174756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTC CCCGCGCGAA ACTGACGAAC ACATTTCCGG GCTGTCCAGT GGAGTCGGCC TTGAGCTTCA TCGACGGCAA ATGGAAGGGC GTCATTCTCT ATCACCTGAT GAGCGAAGGC ATCCTGCGCT TCAACGAGCT GCGCAGAAGG CTGCCGAGCG TGACGCCACG TATGCTGACC AGGCAGTTGC GTGAACTGGA GGAGGCGGCG CTGCTGTCGC GCACGGTCTT TCCGGTCGTT CCGCCGCGTG TCGACTACGC TTTGACGGCA AGGGGAGAAA GCCTGAAACC GGTGATTATG GCCCTGAAAG CCTGGGGCGA CGAGAATGTT CTCTGCGACG GAGACCGGAT GACGCTGAAG CCGGCCGAAT CCCGATCACG GCCGGAACGC AAACGGGCCT GA
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Protein sequence | MSRPRAKLTN TFPGCPVESA LSFIDGKWKG VILYHLMSEG ILRFNELRRR LPSVTPRMLT RQLRELEEAA LLSRTVFPVV PPRVDYALTA RGESLKPVIM ALKAWGDENV LCDGDRMTLK PAESRSRPER KRA
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