| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0647 |
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| Symbol | |
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| ID | 5321483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 698202 |
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| End bp | 699071 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789583 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001326338 |
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| Protein GI | 150395871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.268073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGG CCAACGACCT CTCCCCCTCC GAACTCGCAG CCCTTCTCGC CTTCCATGCG
GAAGCGGGTG TCGAATGGTT GATCGAGGAA GAACCCCTCG ACCGGCTGGC GGAATTCGAA
GCTATGAGGA TGAGGCGCAC GGAGAGCCGT GCCGCGCCAC AAGCCAACGA GATGGCAGCC
GAACGGCGGC AACCCGTACC TGAGACCACC GCGCGCGAGC GCGCTCAGGC CGCGCCGACC
GCGCGCCCTC CTGTCGTCGC AATACCGGAC GAACAGGCCA TCAAAGAGGC ACAGTTCGTC
GCCGGTGCCG CACGATCGCT CGGAGAGTTG CGCACCGCCA TGGAGGCGTT TTCCGGGTGC
AATCTCAGAA ATAGCGCCCG CAACCTCGTC TTTGCCGAAG GCAGTGCTGC CTCCGGAGTC
ATGATCATCG GTCCGATGCC CTACGCGGAC GACGACCGCG ACGGTCACCC CTTTGCGGGC
AGGCACGGCC AGATGCTCGA ACGCATGCTG TTCGGCATCG GCCTGTCGCG TGACGACGTC
CTTCTCACAA ATACAGTGCC CTGGCGTCCG CCGGGGAACC GCGTGCCGAG CGCTCGCGAG
GCGGATATCT GCCGCCCTTT CATCGAGCGC CAGATCGAAC TGGCCGAACC CAAACAGCTG
CTGCTTCTCG GCAATTTCAC CGCTCGCTTC TTCTTCGGCG GCGCTGAAAT GATCCATCAG
TTGCGCGGCG AATGGCGCGA GCTCACATTT GCTGGGACCA GCATACCGGC GCTCGCCACC
CTGCATCCCC AGGACCTCAT CGCAGCCCCG ATAAACAAGC GCTTCGCCTG GCTGGACCTG
CTGGCGTTCA AATCCCGTCC CGAATTGTGA
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| Protein sequence | MISANDLSPS ELAALLAFHA EAGVEWLIEE EPLDRLAEFE AMRMRRTESR AAPQANEMAA
ERRQPVPETT ARERAQAAPT ARPPVVAIPD EQAIKEAQFV AGAARSLGEL RTAMEAFSGC
NLRNSARNLV FAEGSAASGV MIIGPMPYAD DDRDGHPFAG RHGQMLERML FGIGLSRDDV
LLTNTVPWRP PGNRVPSARE ADICRPFIER QIELAEPKQL LLLGNFTARF FFGGAEMIHQ
LRGEWRELTF AGTSIPALAT LHPQDLIAAP INKRFAWLDL LAFKSRPEL
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