Gene Smed_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0632 
Symbol 
ID5321468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp677790 
End bp678236 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content69% 
IMG OID640789568 
Productputative outer-membranne lipoprotein 
Protein accessionYP_001326323 
Protein GI150395856 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0962709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.80655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGG CCTTCGCGTC GAGCGGCAGG ATCGCAGTCG TGGCATCGAG CGTAGCCCTG 
AGCGGCTGTG GCACGACCTC GTCCGGCCAA GGCGGGGCGG TTGCGGGCCT TGGCGCAGCC
TCTACCCGCG TTGTGTCATC CGCGACGTAT ATCGAGGCCC TGCAGGGCGG TGTCGTTTCG
CGCCTCGCCG GCGTCGACCT CGGCAAGTCC GATCGGCAGC GGGCGCTTGA GGCTGAGTAT
CGTGCGCTCG AGGCGGCGCC GGGCGGACAG CCCGTCGCCT GGCAGGGGCG CGGCGTCAGC
GGCTCAGTCG TCGCGGCCGC ACCCTATCAG GTCGGGTCGC AAAATTGCCG CCAATACAGC
CATACGGTCA CGGTCAAGGG TCAGCAAAGC ACGGCACGGG GTGCTGCCTG CCGCAACAGT
GATGGAAGCT GGACACCGCT CACCTGA
 
Protein sequence
MTRAFASSGR IAVVASSVAL SGCGTTSSGQ GGAVAGLGAA STRVVSSATY IEALQGGVVS 
RLAGVDLGKS DRQRALEAEY RALEAAPGGQ PVAWQGRGVS GSVVAAAPYQ VGSQNCRQYS
HTVTVKGQQS TARGAACRNS DGSWTPLT