Gene Smed_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0620 
Symbol 
ID5321456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp667251 
End bp668309 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content62% 
IMG OID640789556 
Producthypothetical protein 
Protein accessionYP_001326311 
Protein GI150395844 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCG TTTTAGGATA TGTCGTGACA AACCGGTTTC GTGAGTTGGA ACGGCCGCAG 
ACGGGGCGGC TGAAGGATGT CGTGCTGATG GCGACAGTCA CCGGCTTCGA GAGCCTTCGC
ATTCCCAGCA GGTCCGACAT GAAGCAGTTT GCCGAATTGT TCGAGCCGCT CTTCCTCGGC
TCCAGCAATG AGGCACGCCG CCAGGCGGCT GCAGCCCTCT CCCAGTGCCC GCACGTGCCG
GAATCCGTGG TCCTGCTGAT CGGCAGCATG CCGATTTCAA TTGCCGCCGC CTTCCTCACC
CGCGCCAGGG CAATTCCCGA TCGCGTGCTC GTTTCCATCA TCCGTGAGCA AGGCCCGGCC
CATGCCAGGG CCATTGCCCG CCGGGAAAAC CTGTCGCCTT CAGCAATCGA TGCGCTCGTC
GAACATCACC AGCCCGCGCA TTCTGAAGAG CGGCTCGATG GCGGTAGCGA TCATCGCGCT
CCAGGCGCGC GCCAGACGCA AGCGCCTACC GCCGTCGCCG ACCGCGAAGA AAAACTGCGG
GCGGAAATCA AGGCGCTGGC GCGGGTCGGA TCACAGGAGA AGAGCGACAG ATCGCTTATC
CAGCCCATCG GTGAACTGCA TTGCGCGCTT CTCGTTCGTT TCGCACGCAA TGGCGAAACG
GCGCTCTTTT CCACCGCGCT CGCAGACGCA CTCGGAACAA GCCGCGCCCT CGCCGACCGT
ATTTTGCTGG ATGTTTCCGG CCAGCAACTC GCTGCAGCGC TTGCAGCTCT GTCCTTTCCG
GCGGGCGAGG AAACCCGTGT GCTCGAATTG CTTTATCCAC ATCTTTCCGA AAGGATCGGT
GGCGGAAATC GCGCCGAGGC GCTGATCAGA AATCTCGACC GGCAGGCGAG CATCGAAAGG
GTTGCCTCCT GGCTCCGCGC CGATGCGGGA CCGCGGCCAC CCCGTCATGA ACGCCTTCTC
GCTGACAACC GGGCCGCGGA TCCGCGTCGG CAAGAGTCCC AATCCATTGC AAGTCAAAGC
AAGACCGCCG ATGCGAAGCG AAGCTTCGGC CGACAGTAA
 
Protein sequence
MLCVLGYVVT NRFRELERPQ TGRLKDVVLM ATVTGFESLR IPSRSDMKQF AELFEPLFLG 
SSNEARRQAA AALSQCPHVP ESVVLLIGSM PISIAAAFLT RARAIPDRVL VSIIREQGPA
HARAIARREN LSPSAIDALV EHHQPAHSEE RLDGGSDHRA PGARQTQAPT AVADREEKLR
AEIKALARVG SQEKSDRSLI QPIGELHCAL LVRFARNGET ALFSTALADA LGTSRALADR
ILLDVSGQQL AAALAALSFP AGEETRVLEL LYPHLSERIG GGNRAEALIR NLDRQASIER
VASWLRADAG PRPPRHERLL ADNRAADPRR QESQSIASQS KTADAKRSFG RQ